Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq11 235 6e-60 seq9 232 7e-59 >seq11 Length=9596 Score = 235 bits (260), Expect = 6e-60 Identities = 167/189 (88%), Gaps = 2/189 (1%) Strand=Plus/Plus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT-GCTCGAATA 60 || |||||| |||||||||||||||||||||| ||||||||||||| ||| ||||||||| Sbjct 1670 GATCCAGGATTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTTTTGCTCGAATA 1729 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 |||| |||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 1730 TATTAGCATGGAATAATAGAATAGGACGATTGGTTCTATTTTGTTGGTTTCTAGGACC-A 1788 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 ||||||||| |||| ||| |||||||| |||||||||| |||||| ||||||||||| Sbjct 1789 TCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTC 1848 Query 181 TTGGATTTA 189 ||||||||| Sbjct 1849 TTGGATTTA 1857 Score = 120 bits (132), Expect = 3e-25 Identities = 80/88 (91%), Gaps = 1/88 (1%) Strand=Plus/Plus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGC-CTTTGCTCGAATA 60 || ||||| |||||||||||||||||||||| ||||||||||||| |||||||||||| Sbjct 9508 GATCCAGGCTTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTTTTGCTCGAATA 9567 Query 61 CATTACCATGGAATAATAGAATAGGACG 88 |||| |||||||||||||||||||||| Sbjct 9568 TATTAGCATGGAATAATAGAATAGGACG 9595 >seq9 Length=3620 Score = 232 bits (256), Expect = 7e-59 Identities = 166/189 (88%), Gaps = 2/189 (1%) Strand=Plus/Minus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTT-GCTCGAATA 60 || ||||| |||||||||||||||||||||| ||||||||||||| ||| ||||||||| Sbjct 535 GATCCAGGMTTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTTTTGCTCGAATA 476 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 |||| |||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 475 TATTAGCATGGAATAATAGAATAGGACGATTGGTTCTATTTTGTTGGTTTCTAGGACC-A 417 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 ||||||||| |||| ||| |||||||| |||||||||| |||||| ||||||||||| Sbjct 416 TCGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAGTTGTCAGAGGTGAAATTC 357 Query 181 TTGGATTTA 189 ||||||||| Sbjct 356 TTGGATTTA 348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511999910720