Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq11 212 1e-52
>seq11
Length=9596
Score = 212 bits (234), Expect = 1e-52
Identities = 228/293 (78%), Gaps = 19/293 (6%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| | | |||||| |||||||||||||||||||||||| |||||| |
Sbjct 6401 GTACGAGAGGAACAGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 6458
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
Sbjct 6459 GCCGCGAAGCTACCATCTGTTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 6518
Query 121 GAACGGGGTGATTCTCT--CCTGCACATCGTAGTCGGATACGAATAGG-----CTT---- 169
||| | | ||||| | | | | |||||| ||| ||||||||||| | |||
Sbjct 6519 GAAAGCGATGATTTTTTGCCTTACACATCATAGATGGATACGAATAAGGTGTTCTTGTAG 6578
Query 170 CGGCCCCGAACCTTAGCAGGCCGGCAACGGGCGTCC--CGCGGAA--GCGCGGGGCGCTC 225
| | | ||||| |||||||| |||||| ||||| | ||||| | ||||| |
Sbjct 6579 CACCGCTGAACCATAGCAGGCTGGCAAC-GGCGTTCTTTCCGGAAAGGGATTGGGCG-TT 6636
Query 226 AGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||| | |||||||| ||| |||| ||||||||| |||| | |||||
Sbjct 6637 TGCTGGTGAATTGCAATGTCATTTTGCGTGAGGATAAATCATTTGTAAACGAC 6689
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819199857152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |