Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq11 212 1e-52 >seq11 Length=9596 Score = 212 bits (234), Expect = 1e-52 Identities = 228/293 (78%), Gaps = 19/293 (6%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | |||||| |||||||||||||||||||||||| |||||| | Sbjct 6401 GTACGAGAGGAACAGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 6458 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct 6459 GCCGCGAAGCTACCATCTGTTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 6518 Query 121 GAACGGGGTGATTCTCT--CCTGCACATCGTAGTCGGATACGAATAGG-----CTT---- 169 ||| | | ||||| | | | | |||||| ||| ||||||||||| | ||| Sbjct 6519 GAAAGCGATGATTTTTTGCCTTACACATCATAGATGGATACGAATAAGGTGTTCTTGTAG 6578 Query 170 CGGCCCCGAACCTTAGCAGGCCGGCAACGGGCGTCC--CGCGGAA--GCGCGGGGCGCTC 225 | | | ||||| |||||||| |||||| ||||| | ||||| | ||||| | Sbjct 6579 CACCGCTGAACCATAGCAGGCTGGCAAC-GGCGTTCTTTCCGGAAAGGGATTGGGCG-TT 6636 Query 226 AGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 ||||| | |||||||| ||| |||| ||||||||| |||| | ||||| Sbjct 6637 TGCTGGTGAATTGCAATGTCATTTTGCGTGAGGATAAATCATTTGTAAACGAC 6689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199857152