Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27]
18 sequences; 8,807,786 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq14 163 2e-35
seq1 118 8e-22
>seq14
Length=1507144
Score = 163 bits (180), Expect = 2e-35
Identities = 550/853 (64%), Gaps = 4/853 (0%)
Strand=Plus/Plus
Query 66089 ATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTAC 66148
|| || ||||| |||| ||||||| || ||| || ||||||||||| | ||| |
Sbjct 781195 ATTGTACCCAAGTTCTTTTGATTAGATTTTTTATTACAAGCATCCTTGTAAACAATGAAA 781254
Query 66149 GGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC 66208
||||| || || || ||||| || | |||||||| ||| | | ||||| |
Sbjct 781255 GGAGTACCAGTTTCGGTTTGGGCTTCTAAGATGGCGTACCATAACTTTTGAGCCTTGATG 781314
Query 66209 GTACGTACCGCC-CTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACC 66267
|| | | | || ||||||| ||||||| || || || || | ||| ||| |||||
Sbjct 781315 GT-CTTTCTACCTCTACCTTCTAGTTCGTATTGGTCATAWAGCTTTTCAAAGTCATCACC 781373
Query 66268 CCATACTTCGGACAGACATGGACACTTGTGT-GGACACATCAGCGACCAATCACCATCCT 66326
| | || || || ||| ||| | ||| | | | | |||||||||||
Sbjct 781374 ATAAGCATCRCTCAAACCAGGAG-CTTCACTAGGAGAGAATAAAGTCCAATCACCATTTG 781432
Query 66327 GTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTC 66386
| || | ||| || | ||||| ||||| | || ||| | ||| | ||||
Sbjct 781433 CCTTGACTCTCTTCATGAACAAGTCAGGAATCCATAAAGCTGGGAATAAATCTCTAGCTC 781492
Query 66387 GTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCC 66446
|| || | ||||||||||| | | ||||| ||| |||||||| || | ||||
Sbjct 781493 TGATTTCTTCCTTACCGTGATTTTTTCTGATGTCGATGAAATCAAAGATATCAGAGTGCC 781552
Query 66447 ATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGC 66506
||||||| ||||| | || || | || | |||| |||||||| || || || |
Sbjct 781553 ATGGTTCTAGGTACAGAGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATCAACATATC 781612
Query 66507 GAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGC 66566
|| |||||||| || | | ||| || | | || || || | |||||||| |
Sbjct 781613 TGGCAGTGTTGTTGAAAACTCTAACCATAGGAATCAAACCATTGGAAGTACCATTGGTAC 781672
Query 66567 CGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCG 66626
| | ||| || || | | || | ||||| | | |||||||||||| || |
Sbjct 781673 CAGCAATGTAAGAGCCAGTGGATCTGATGTTGTGAATGTGTAAACCAATACCACCKGCAG 781732
Query 66627 TCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCT 66686
|||| || || |||||| || | || | || |||||||| || ||| |||
Sbjct 781733 TCTTAGAAATTTGAGCACATTCCTTYAAGGTATCATAGATACCGTCAATAGAATCATCCT 781792
Query 66687 TGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGG 66746
| || | | | | | || ||| | ||| ||| | || || | || ||| || |
Sbjct 781793 TCATAGAAATTAAGAAACAAGAAGACATTTGAGGTCTTGGAGTACCAGCATTGAATAGTG 781852
Query 66747 TGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCAT 66806
| || | ||| || |||||||| ||||||| | ||||| || |||||||| |
Sbjct 781853 TTGGAGAAGCATGGGTAAAGTATCTTTGAGACATCAAGTTGTAAGTTTCGATGACTTTTT 781912
Query 66807 CAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGA 66866
|||||||||| || || || || | ||| || ||| | | | ||| || | ||| |
Sbjct 781913 CAATGTTTTCACCGTGGATACCAACAGCAACTCTCATRATCAAATGTTGTGGTCTTTCAA 781972
Query 66867 CCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACG 66926
| | | | | ||||| | || |||||| || | ||||| ||||||| |||||| ||
Sbjct 781973 CGATCTTACCATTGATCTTCAATAAGTATGATCTTTCCAATGTCTTGAAACCAAAATAGT 782032
Query 66927 AGTAATTGAAATC 66939
||| ||||||||
Sbjct 782033 TGTAGTTGAAATC 782045
Score = 93.3 bits (102), Expect = 3e-14
Identities = 90/116 (78%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 65462 TAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGAT 65521
|| ||||| || |||| ||||| || ||||| ||| |||| |||||||| ||||||
Sbjct 780574 TACATGTTAGAAGTGAATGGTTCGAAACATTCATTGTAACCTAAAATTTGGGAAGTAGAA 780633
Query 65522 GCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTT 65577
||||||||||| ||||| ||||| || ||||||| || |||| | | |||| ||
Sbjct 780634 GCAGTTGGCATAGGAGCAACCAATAAGGAGTTTCTTAAACCGTGCTTGGCAATCTT 780689
>seq1
Length=1289090
Score = 118 bits (130), Expect = 8e-22
Identities = 348/534 (65%), Gaps = 5/534 (1%)
Strand=Plus/Plus
Query 61108 GCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGG 61167
|| |||||||| |||||||| | || || |||||||||| || || | | || |||
Sbjct 687711 GCCGAAGCTTCTTTCTGGACCGCTGAAGAAATCGATTTGTCTAAGGATTTACACGATTGG 687770
Query 61168 GAGCGTTTATCGAGCGG---TGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCC 61224
| | || | |||| | ||||||| | || ||||| ||||||||
Sbjct 687771 AATAACAGAATGAATGAAAATGAAAGATTTTTCATTTCAAGAGTMTTGGCTTTCTTTGCT 687830
Query 61225 GCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTG 61284
||||| || ||||| |||||||| || || | ||| ||| | || || ||| |
Sbjct 687831 GCTTCTGATGGTATTGTCAATGAAAACTTGGTTGAAAAYTTCTCTGCTGAAGTTCAAATT 687890
Query 61285 TCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATG 61344
| || || ||||||||||| ||||| ||| ||||| || | ||||| || |
Sbjct 687891 CCAGAAGCTAAGTGTTTCTACGGTTTCCAAATTATGATGGAAAACATTCACTCTGAAACT 687950
Query 61345 TACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAAT 61404
|| | | | | || || ||||||| ||| | |||| ||| || || ||
Sbjct 687951 TATTCTTTATTATTAGACACATACATCAAGGATCCAAAGGAAAATGATTTCTTATTAAAC 688010
Query 61405 GCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGAT-CAC 61463
|| || || || || || | | ||| || || || ||||| | | ||||| ||
Sbjct 688011 GCTATAGAAACTATTCCTGAAATTAAGGAAAAGGCTGAATGGGCTATTAGATGGATTCAA 688070
Query 61464 CAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATT 61523
| | ||| || |||| |||| || || | || ||||| | || || ||||| ||
Sbjct 688071 GATAAGGACG-CTTTGTTTGCTGAAAGACTGGTTGCTTTTGCTGCTGTTGAAGGTGTCTT 688129
Query 61524 TTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCT 61583
|||| ||| || ||||| || ||||| |||||||||||| || | ||||| ||| |
Sbjct 688130 TTTCTCTGGTTCATTTGCTGCTATCTTCTGGTTGAAGAAAAAGGGTTTGATGCCTGGTTT 688189
Query 61584 GACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGC 61637
||| ||| ||| || ||||| | | || || || | ||| ||| |||||
Sbjct 688190 GACTTTCTCCAACGAATTGATCTGTAGAGATGAAGGTTTACATACTGACTTTGC 688243
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567912783520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |