Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20uvarum_20[genbank_20GCA_5F001747055.1_202016-09-27] 18 sequences; 8,807,786 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq14 163 2e-35 seq1 118 8e-22 >seq14 Length=1507144 Score = 163 bits (180), Expect = 2e-35 Identities = 550/853 (64%), Gaps = 4/853 (0%) Strand=Plus/Plus Query 66089 ATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTAC 66148 || || ||||| |||| ||||||| || ||| || ||||||||||| | ||| | Sbjct 781195 ATTGTACCCAAGTTCTTTTGATTAGATTTTTTATTACAAGCATCCTTGTAAACAATGAAA 781254 Query 66149 GGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC 66208 ||||| || || || ||||| || | |||||||| ||| | | ||||| | Sbjct 781255 GGAGTACCAGTTTCGGTTTGGGCTTCTAAGATGGCGTACCATAACTTTTGAGCCTTGATG 781314 Query 66209 GTACGTACCGCC-CTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACC 66267 || | | | || ||||||| ||||||| || || || || | ||| ||| ||||| Sbjct 781315 GT-CTTTCTACCTCTACCTTCTAGTTCGTATTGGTCATAWAGCTTTTCAAAGTCATCACC 781373 Query 66268 CCATACTTCGGACAGACATGGACACTTGTGT-GGACACATCAGCGACCAATCACCATCCT 66326 | | || || || ||| ||| | ||| | | | | ||||||||||| Sbjct 781374 ATAAGCATCRCTCAAACCAGGAG-CTTCACTAGGAGAGAATAAAGTCCAATCACCATTTG 781432 Query 66327 GTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTC 66386 | || | ||| || | ||||| ||||| | || ||| | ||| | |||| Sbjct 781433 CCTTGACTCTCTTCATGAACAAGTCAGGAATCCATAAAGCTGGGAATAAATCTCTAGCTC 781492 Query 66387 GTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCC 66446 || || | ||||||||||| | | ||||| ||| |||||||| || | |||| Sbjct 781493 TGATTTCTTCCTTACCGTGATTTTTTCTGATGTCGATGAAATCAAAGATATCAGAGTGCC 781552 Query 66447 ATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGC 66506 ||||||| ||||| | || || | || | |||| |||||||| || || || | Sbjct 781553 ATGGTTCTAGGTACAGAGCAAAGGCACCAGGTCTTTTGTTACCACCTTGATCAACATATC 781612 Query 66507 GAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGC 66566 || |||||||| || | | ||| || | | || || || | |||||||| | Sbjct 781613 TGGCAGTGTTGTTGAAAACTCTAACCATAGGAATCAAACCATTGGAAGTACCATTGGTAC 781672 Query 66567 CGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCG 66626 | | ||| || || | | || | ||||| | | |||||||||||| || | Sbjct 781673 CAGCAATGTAAGAGCCAGTGGATCTGATGTTGTGAATGTGTAAACCAATACCACCKGCAG 781732 Query 66627 TCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCT 66686 |||| || || |||||| || | || | || |||||||| || ||| ||| Sbjct 781733 TCTTAGAAATTTGAGCACATTCCTTYAAGGTATCATAGATACCGTCAATAGAATCATCCT 781792 Query 66687 TGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGG 66746 | || | | | | | || ||| | ||| ||| | || || | || ||| || | Sbjct 781793 TCATAGAAATTAAGAAACAAGAAGACATTTGAGGTCTTGGAGTACCAGCATTGAATAGTG 781852 Query 66747 TGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCAT 66806 | || | ||| || |||||||| ||||||| | ||||| || |||||||| | Sbjct 781853 TTGGAGAAGCATGGGTAAAGTATCTTTGAGACATCAAGTTGTAAGTTTCGATGACTTTTT 781912 Query 66807 CAATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGA 66866 |||||||||| || || || || | ||| || ||| | | | ||| || | ||| | Sbjct 781913 CAATGTTTTCACCGTGGATACCAACAGCAACTCTCATRATCAAATGTTGTGGTCTTTCAA 781972 Query 66867 CCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTACG 66926 | | | | | ||||| | || |||||| || | ||||| ||||||| |||||| || Sbjct 781973 CGATCTTACCATTGATCTTCAATAAGTATGATCTTTCCAATGTCTTGAAACCAAAATAGT 782032 Query 66927 AGTAATTGAAATC 66939 ||| |||||||| Sbjct 782033 TGTAGTTGAAATC 782045 Score = 93.3 bits (102), Expect = 3e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 65462 TAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGAT 65521 || ||||| || |||| ||||| || ||||| ||| |||| |||||||| |||||| Sbjct 780574 TACATGTTAGAAGTGAATGGTTCGAAACATTCATTGTAACCTAAAATTTGGGAAGTAGAA 780633 Query 65522 GCAGTTGGCATGGGAGCGACCAACAATGAGTTTCGCAATCCGTTCATTTCAATGTT 65577 ||||||||||| ||||| ||||| || ||||||| || |||| | | |||| || Sbjct 780634 GCAGTTGGCATAGGAGCAACCAATAAGGAGTTTCTTAAACCGTGCTTGGCAATCTT 780689 >seq1 Length=1289090 Score = 118 bits (130), Expect = 8e-22 Identities = 348/534 (65%), Gaps = 5/534 (1%) Strand=Plus/Plus Query 61108 GCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGG 61167 || |||||||| |||||||| | || || |||||||||| || || | | || ||| Sbjct 687711 GCCGAAGCTTCTTTCTGGACCGCTGAAGAAATCGATTTGTCTAAGGATTTACACGATTGG 687770 Query 61168 GAGCGTTTATCGAGCGG---TGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCC 61224 | | || | |||| | ||||||| | || ||||| |||||||| Sbjct 687771 AATAACAGAATGAATGAAAATGAAAGATTTTTCATTTCAAGAGTMTTGGCTTTCTTTGCT 687830 Query 61225 GCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTG 61284 ||||| || ||||| |||||||| || || | ||| ||| | || || ||| | Sbjct 687831 GCTTCTGATGGTATTGTCAATGAAAACTTGGTTGAAAAYTTCTCTGCTGAAGTTCAAATT 687890 Query 61285 TCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATG 61344 | || || ||||||||||| ||||| ||| ||||| || | ||||| || | Sbjct 687891 CCAGAAGCTAAGTGTTTCTACGGTTTCCAAATTATGATGGAAAACATTCACTCTGAAACT 687950 Query 61345 TACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAAT 61404 || | | | | || || ||||||| ||| | |||| ||| || || || Sbjct 687951 TATTCTTTATTATTAGACACATACATCAAGGATCCAAAGGAAAATGATTTCTTATTAAAC 688010 Query 61405 GCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGAT-CAC 61463 || || || || || || | | ||| || || || ||||| | | ||||| || Sbjct 688011 GCTATAGAAACTATTCCTGAAATTAAGGAAAAGGCTGAATGGGCTATTAGATGGATTCAA 688070 Query 61464 CAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATT 61523 | | ||| || |||| |||| || || | || ||||| | || || ||||| || Sbjct 688071 GATAAGGACG-CTTTGTTTGCTGAAAGACTGGTTGCTTTTGCTGCTGTTGAAGGTGTCTT 688129 Query 61524 TTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCT 61583 |||| ||| || ||||| || ||||| |||||||||||| || | ||||| ||| | Sbjct 688130 TTTCTCTGGTTCATTTGCTGCTATCTTCTGGTTGAAGAAAAAGGGTTTGATGCCTGGTTT 688189 Query 61584 GACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGC 61637 ||| ||| ||| || ||||| | | || || || | ||| ||| ||||| Sbjct 688190 GACTTTCTCCAACGAATTGATCTGTAGAGATGAAGGTTTACATACTGACTTTGC 688243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567912783520