Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq180 206 4e-51 >seq180 Length=7846 Score = 206 bits (228), Expect = 4e-51 Identities = 226/293 (77%), Gaps = 18/293 (6%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | |||||| |||||||||||||||||||||||| |||||| | Sbjct 858 GTACGAGAGGAACAGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 801 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 800 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 741 Query 121 GAACGGGGTGA-TTCTCTCC--TGCACATCGTAGTCGGATACGAATAGGCTTC------- 170 ||| | | ||| |||| ||| ||||| ||| ||||| ||||| | | | Sbjct 740 GAAAGCGATGATTTCTTTCCCTCACACATTTTAGATGGATAAGAATAAGGTGCATTTATT 681 Query 171 --GGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTC 225 | | ||||| |||||||| |||||||| || |||||| || ||| ||| Sbjct 680 GTACCGCTGAACCATAGCAGGCTGGCAACGGTGCTCTTAGCGGAAAGGCTTTGGGTGCT- 622 Query 226 AGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 || || |||||||||| ||| |||| ||||||||| |||| | ||||| Sbjct 621 TGCCGGTGGATTGCAATGTCATTGTGCGTGAGGATAAATCATTTGTAAACGAC 569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819197579520