Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06] 305 sequences; 11,383,302 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq118 123 8e-24 >seq118 Length=127441 Score = 123 bits (136), Expect = 8e-24 Identities = 498/773 (64%), Gaps = 65/773 (8%) Strand=Plus/Plus Query 1708 GACTCACGCGGTAACCCAACACTTGAAGTAGAAGTTTACACTGAATCTGGTGCATTCGGT 1767 ||||| | ||||||||||| ||||||| |||||| ||| || |||| ||| | Sbjct 106111 GACTCCAGAGGTAACCCAACTGTTGAAGTTGAAGTTACCACCAAAGATGGTATGTTCAGA 106170 Query 1768 CGCGGTATGGTTCCTTCAGGAGCATCAACTGGTGAACACGAAGCAGTAGAACTTCGTGAT 1827 | || ||||| || || || || |||||| |||||||| | ||| | | ||| Sbjct 106171 TCC---ATTGTTCCATCTGGTGCTTCCACTGGTATCCACGAAGCTTTGGAATTGAGAGAT 106227 Query 1828 GGTGACAAAGCTCGTTACGGT--GGTCTTGGTACTCAAAAAGCAGTTGATAACGTAAACA 1885 ||||||||| || | ||| ||| ||| | ||||| |||| ||||| ||| Sbjct 106228 GGTGACAAA--TCCAAATGGTTGGGTAAAGGTGTTTTGAAAGCCGTTGCCAACGTCAACG 106285 Query 1886 ACGTTATTGCTG-AGC----ACATCATC-GGATTCGACGTACGTGATCAACAAGGTATTG 1939 | || |||||| ||| || || || || || ||||| ||| ||| ||| | ||| Sbjct 106286 ATGTCATTGCTCCAGCTTTGACCTCTTCTGGTTTGGACGTTGCTGACCAAGAAGCTGTTG 106345 Query 1940 ACCGCGCAATGATCGCTCTTGACGGTACTCCAAACAAAGGTAAACTTGGTGCCAACGCTA 1999 | ||| | | ||||||||||||||||||| |||| | ||||| ||||||| Sbjct 106346 ATGCTTTCTTGAACAAATTGGACGGTACTCCAAACAAAGCTAAATTGGGTGCTAACGCTA 106405 Query 2000 TTCTTGGTGTGTCTATCGCTGTAGCACGCGCAGCTGCTGACTACCTTGAAGTTCCACTTT 2059 || | ||||| || || ||||| || || ||||||| | | | |||||| | | Sbjct 106406 TTTTGGGTGTCTCCATGGCTGTTGCTAAAGCTGCTGCTGCCGCCAAAAACGTTCCATTGT 106465 Query 2060 ACAGCTAC--------CTTGG----CGG----ATTCAACACTAA--AGTTCTTCCAACTC 2101 || || ||||| ||| | ||||| | ||| | ||| || Sbjct 106466 ACGAACACTTGAACCACTTGGCTTACGGTGCTGCTAAACACCCATTGGTTTTGCCAGTTC 106525 Query 2102 CAATGATGAACATCATCAACGGTGGTTCTCACTCAGACGCTCCAATCGCTTTCCAAGAAT 2161 || | ||||| | | ||||||||||| ||| | | | | | | ||||| ||||||| Sbjct 106526 CATTCTTGAACGTTTTGAACGGTGGTTCCCACGCTGGTGGTGCTTTGGCTTTGCAAGAAT 106585 Query 2162 TTATGATTGTACCTGCTGGTGCACCAACATTCAAAGAAGCGCTTCGTTGGGGTGCTGAAA 2221 ||||||||| || ||||||| ||| | ||| ||||| | | ||| ||||| Sbjct 106586 TTATGATTGCTCCAACTGGTGCTCCATCTTTCTCTGAAGCTTTGAGAATCGGTTCTGAAG 106645 Query 2222 TCTTCCACGCGCTTAAGAAAATCCTT------AAAGAA----CGTGG----ACTTGAAAC 2267 | | |||| | ||| ||||| || |||||| |||| || | || Sbjct 106646 TTTACCAC-CACTT---GAAATCTTTGACCAAAAAGAAATACGGTGGTTCCGCTGGTAA- 106700 Query 2268 AGCCGTAGGTGACGAAGGTGGTTTCGCACCTCGTTTCGACGGAACTGAAGATGGTGTTGA 2327 ||| ||||||||||||||| | || || | || || ||||||| | | | || Sbjct 106701 ---CGTCGGTGACGAAGGTGGTGTTGCTCCAGATATCAACACTGCTGAAGAAGCTTTGGA 106757 Query 2328 AACTATCATCAAAGCTATCGAAGCTGCTGGATATGTACCAGGTAAAGACGTATTTATCGG 2387 ||||| | |||||| ||||||| || || | |||| || || || || Sbjct 106758 CTTGATCATGGACGCTATCAAAGCTGCCGGTTACG---AAGGTCAA---GTTGACATTGG 106811 Query 2388 ACTTGACTGTGCATCATCTGAATTCTACGATGCAGAACGTAAAGTTTACGACT 2440 | || ||||| || |||||||||||| | ||| ||||| ||||||| Sbjct 106812 TATGGATTGTGCTTCTTCTGAATTCTACAA---AGACGGTAAA---TACGACT 106858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156037834848420