Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F000585475.2_202014-05-06]
305 sequences; 11,383,302 total letters
Query= NC_023503.1
Length=48800
Score E
Sequences producing significant alignments: (Bits) Value
seq118 123 8e-24
>seq118
Length=127441
Score = 123 bits (136), Expect = 8e-24
Identities = 498/773 (64%), Gaps = 65/773 (8%)
Strand=Plus/Plus
Query 1708 GACTCACGCGGTAACCCAACACTTGAAGTAGAAGTTTACACTGAATCTGGTGCATTCGGT 1767
||||| | ||||||||||| ||||||| |||||| ||| || |||| ||| |
Sbjct 106111 GACTCCAGAGGTAACCCAACTGTTGAAGTTGAAGTTACCACCAAAGATGGTATGTTCAGA 106170
Query 1768 CGCGGTATGGTTCCTTCAGGAGCATCAACTGGTGAACACGAAGCAGTAGAACTTCGTGAT 1827
| || ||||| || || || || |||||| |||||||| | ||| | | |||
Sbjct 106171 TCC---ATTGTTCCATCTGGTGCTTCCACTGGTATCCACGAAGCTTTGGAATTGAGAGAT 106227
Query 1828 GGTGACAAAGCTCGTTACGGT--GGTCTTGGTACTCAAAAAGCAGTTGATAACGTAAACA 1885
||||||||| || | ||| ||| ||| | ||||| |||| ||||| |||
Sbjct 106228 GGTGACAAA--TCCAAATGGTTGGGTAAAGGTGTTTTGAAAGCCGTTGCCAACGTCAACG 106285
Query 1886 ACGTTATTGCTG-AGC----ACATCATC-GGATTCGACGTACGTGATCAACAAGGTATTG 1939
| || |||||| ||| || || || || || ||||| ||| ||| ||| | |||
Sbjct 106286 ATGTCATTGCTCCAGCTTTGACCTCTTCTGGTTTGGACGTTGCTGACCAAGAAGCTGTTG 106345
Query 1940 ACCGCGCAATGATCGCTCTTGACGGTACTCCAAACAAAGGTAAACTTGGTGCCAACGCTA 1999
| ||| | | ||||||||||||||||||| |||| | ||||| |||||||
Sbjct 106346 ATGCTTTCTTGAACAAATTGGACGGTACTCCAAACAAAGCTAAATTGGGTGCTAACGCTA 106405
Query 2000 TTCTTGGTGTGTCTATCGCTGTAGCACGCGCAGCTGCTGACTACCTTGAAGTTCCACTTT 2059
|| | ||||| || || ||||| || || ||||||| | | | |||||| | |
Sbjct 106406 TTTTGGGTGTCTCCATGGCTGTTGCTAAAGCTGCTGCTGCCGCCAAAAACGTTCCATTGT 106465
Query 2060 ACAGCTAC--------CTTGG----CGG----ATTCAACACTAA--AGTTCTTCCAACTC 2101
|| || ||||| ||| | ||||| | ||| | ||| ||
Sbjct 106466 ACGAACACTTGAACCACTTGGCTTACGGTGCTGCTAAACACCCATTGGTTTTGCCAGTTC 106525
Query 2102 CAATGATGAACATCATCAACGGTGGTTCTCACTCAGACGCTCCAATCGCTTTCCAAGAAT 2161
|| | ||||| | | ||||||||||| ||| | | | | | | ||||| |||||||
Sbjct 106526 CATTCTTGAACGTTTTGAACGGTGGTTCCCACGCTGGTGGTGCTTTGGCTTTGCAAGAAT 106585
Query 2162 TTATGATTGTACCTGCTGGTGCACCAACATTCAAAGAAGCGCTTCGTTGGGGTGCTGAAA 2221
||||||||| || ||||||| ||| | ||| ||||| | | ||| |||||
Sbjct 106586 TTATGATTGCTCCAACTGGTGCTCCATCTTTCTCTGAAGCTTTGAGAATCGGTTCTGAAG 106645
Query 2222 TCTTCCACGCGCTTAAGAAAATCCTT------AAAGAA----CGTGG----ACTTGAAAC 2267
| | |||| | ||| ||||| || |||||| |||| || | ||
Sbjct 106646 TTTACCAC-CACTT---GAAATCTTTGACCAAAAAGAAATACGGTGGTTCCGCTGGTAA- 106700
Query 2268 AGCCGTAGGTGACGAAGGTGGTTTCGCACCTCGTTTCGACGGAACTGAAGATGGTGTTGA 2327
||| ||||||||||||||| | || || | || || ||||||| | | | ||
Sbjct 106701 ---CGTCGGTGACGAAGGTGGTGTTGCTCCAGATATCAACACTGCTGAAGAAGCTTTGGA 106757
Query 2328 AACTATCATCAAAGCTATCGAAGCTGCTGGATATGTACCAGGTAAAGACGTATTTATCGG 2387
||||| | |||||| ||||||| || || | |||| || || || ||
Sbjct 106758 CTTGATCATGGACGCTATCAAAGCTGCCGGTTACG---AAGGTCAA---GTTGACATTGG 106811
Query 2388 ACTTGACTGTGCATCATCTGAATTCTACGATGCAGAACGTAAAGTTTACGACT 2440
| || ||||| || |||||||||||| | ||| ||||| |||||||
Sbjct 106812 TATGGATTGTGCTTCTTCTGAATTCTACAA---AGACGGTAAA---TACGACT 106858
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 156037834848420
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |