Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16]
741 sequences; 11,662,932 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq484 206 4e-51
>seq484
Length=35095
Score = 206 bits (228), Expect = 4e-51
Identities = 226/293 (77%), Gaps = 18/293 (6%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| | | |||||| |||||||||||||||||||||||| |||||| |
Sbjct 27680 GTACGAGAGGAACAGTTCA-TTCAGA-TAATTGGTTTTTGCGGCTGTCTGATCAGGCATT 27623
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 27622 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 27563
Query 121 GAACGGGGTGA-TTCTCTCC--TGCACATCGTAGTCGGATACGAATAGGCTTC------- 170
||| | | ||| |||| ||| ||||| ||| ||||| ||||| | | |
Sbjct 27562 GAAAGCGATGATTTCTTTCCCTCACACATTTTAGATGGATAAGAATAAGGTGCATTTATT 27503
Query 171 --GGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTC 225
| | ||||| |||||||| |||||||| || |||||| || ||| |||
Sbjct 27502 GTACCGCTGAACCATAGCAGGCTGGCAACGGTGCTCTTAGCGGAAAGGCTTTGGGTGCT- 27444
Query 226 AGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|| || |||||||||| ||| |||| ||||||||| |||| | |||||
Sbjct 27443 TGCCGGTGGATTGCAATGTCATTGTGCGTGAGGATAAATCATTTGTAAACGAC 27391
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819194119424
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |