Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq627 134 1e-26 >seq627 Length=179744 Score = 134 bits (148), Expect = 1e-26 Identities = 570/885 (64%), Gaps = 18/885 (2%) Strand=Plus/Plus Query 61057 TTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCGGAAGCT 61116 || || ||||| || ||| | || | || || |||| |||||| || |||||| Sbjct 172657 TTTGTTTTGTTTCCAATCAAATACCATGAAATCTGGCAAGCTTACAAACGTGCTGAAGCT 172716 Query 61117 TCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAGCGTTTA 61176 || || ||||| | || || ||||| | |||||||| || | |||||| | | | Sbjct 172717 TCATTTTGGACTGCAGAAGAAATCGATCTTTCCAAAGATATCCACGACTGGAATAATAGA 172776 Query 61177 TCGAGCGG---TGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGAC 61233 || | |||| | |||||||| || || || || || || ||||| || Sbjct 172777 ATGAATGAAAATGAAAGATTTTTCATTAGTAGAGTTTTAGCATTTTTCGCTGCTTCAGAT 172836 Query 61234 GGTATCGTCAATGAGAATTTATTGGAACGTTTC-GCGCAGGAGGTGCAAGTGTCGGAGGC 61292 || || |||||||||||||| |||| |||| | || || ||||| | | || || Sbjct 172837 GGGATTGTCAATGAGAATTTGGTGGAGAATTTCAGTGC-TGAAGTGCAGATTCCAGAAGC 172895 Query 61293 GCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGT 61352 ||||| ||||| ||||| || ||||| ||| |||| || | || | Sbjct 172896 TAAATGTTTTTACGGGTTCCAAATCATGATGGAAAATATCCATAGTGAAACATATTCGCT 172955 Query 61353 TCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGCCATCGA 61412 | | |||||||| || |||| || | ||| ||||| ||||||||||| || || Sbjct 172956 TTTGATCGATACTTATATCAAAGATCCAAAAGAAAGTGAATTCTTGTTCAATGCTATTGA 173015 Query 61413 GACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGA-TCACCAGTACAA 61471 || || || | || ||||| || ||||| | | |||| ||| | | | Sbjct 173016 AACTATTCCACAAATCAAAGAAAAAGCTGAATGGGCTATTAGATGGATTCAAGA-TGAAG 173074 Query 61472 CGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTTTTCAGTG 61531 || ||||| |||| ||||| |||||||||| | || || ||||| || || | Sbjct 173075 ATGCATTATTTGCTGAAAGATTGGTGGCATTTGCTGCTGTTGAAGGTGTTTTCTTTTCCG 173134 Query 61532 GATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCA 61591 | || ||||| ||||| |||||||| |||||| || | ||||| ||| |||| || Sbjct 173135 GTTCATTTGCTGCAATTTTTTGGTTAAAGAAAAAGGGGTTGATGCCAGGTTTGACTTTTT 173194 Query 61592 GCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCA 61651 ||||| ||||| | | || || || | || ||||||||| | | |||| Sbjct 173195 CAAATGAATTGATTTGTAGAGATGAAGGGCTACACACTGATTTTGCATGTCTATTATTTC 173254 Query 61652 AACGCTATCTGGTGAATCGTCC--GTCGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGC 61709 ||| || ||| ||| || || | | || || || ||| || ||| || Sbjct 173255 AAC---ATTTGGAAAATAAACCAGATCCAAAAATCG-CTGAAAGA-ATTATTACTGAAGC 173309 Query 61710 GGTAACTATCG-AACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGCATGA 61768 || |||| | || | || || ||| || || ||||| || || | | || |||| Sbjct 173310 TGTTTCTATTGAAAAAAGATATTTTGA-AGATGCATTGCCTGTTTCTTTATTAGGTATGA 173368 Query 61769 ATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCG-ATTTG 61827 || || | | ||| || ||| ||||||||||||| || | | ||||| | ||| | Sbjct 173369 ATGCTGCATTGATGAATCAATATGTTGAATTTGTTGCTGATAGATTATTGGTTGCATTAG 173428 Query 61828 GGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATTTCGCTG 61887 | ||||| || |||||| ||| ||||||||||| ||||| | ||||| | Sbjct 173429 GTAATGAAAAATAT-TATAATGTTTCAAATCCATTTGATTTTATGGAAAATATTTCATTA 173487 Query 61888 GATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTATCAA 61932 | || || || ||||| || || ||| | || || |||||| Sbjct 173488 GCAGGTAAAACCAATTTCTTTGAAAAAAGAGTTTCTGATTATCAA 173532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397564409588240