Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hanseniaspora_20vineae_20[genbank_20GCA_5F002141495.1_202017-05-16] 741 sequences; 11,662,932 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq584 123 8e-24 >seq584 Length=120332 Score = 123 bits (136), Expect = 8e-24 Identities = 499/773 (65%), Gaps = 65/773 (8%) Strand=Plus/Plus Query 1708 GACTCACGCGGTAACCCAACACTTGAAGTAGAAGTTTACACTGAATCTGGTGCATTCGGT 1767 ||||| | ||||||||||| ||||||| |||||| ||| || |||| ||| | Sbjct 105342 GACTCCAGAGGTAACCCAACTGTTGAAGTTGAAGTTACCACCAAAGATGGTATGTTCAGA 105401 Query 1768 CGCGGTATGGTTCCTTCAGGAGCATCAACTGGTGAACACGAAGCAGTAGAACTTCGTGAT 1827 | || ||||| || || || || |||||| |||||||| | ||| | | ||| Sbjct 105402 TCC---ATTGTTCCATCTGGTGCTTCCACTGGTATCCACGAAGCTTTGGAATTGAGAGAT 105458 Query 1828 GGTGACAAAGCTCGTTACGGT--GGTCTTGGTACTCAAAAAGCAGTTGATAACGTAAACA 1885 ||||||||| || | ||| ||| ||| | ||||| |||| ||||| ||| Sbjct 105459 GGTGACAAA--TCCAAATGGTTGGGTAAAGGTGTTTTGAAAGCCGTTGCCAACGTCAACG 105516 Query 1886 ACGTTATTGCTG-AGC----ACATCATC-GGATTCGACGTACGTGATCAACAAGGTATTG 1939 | || |||||| ||| || || || || || ||||| ||| ||| ||| | ||| Sbjct 105517 ATGTCATTGCTCCAGCTTTGACCTCTTCTGGTTTGGACGTTGCTGACCAAGAAGCTGTTG 105576 Query 1940 ACCGCGCAATGATCGCTCTTGACGGTACTCCAAACAAAGGTAAACTTGGTGCCAACGCTA 1999 | ||| | | ||||||||||||||||||| |||| | ||||| ||||||| Sbjct 105577 ATGCTTTCTTGAACAAATTGGACGGTACTCCAAACAAAGCTAAATTGGGTGCTAACGCTA 105636 Query 2000 TTCTTGGTGTGTCTATCGCTGTAGCACGCGCAGCTGCTGACTACCTTGAAGTTCCACTTT 2059 || | ||||| || || ||||| || || ||||||| | | | |||||| | | Sbjct 105637 TTTTGGGTGTCTCCATGGCTGTTGCTAAAGCTGCTGCTGCCGCCAAAAACGTTCCATTGT 105696 Query 2060 ACAGCTAC--------CTTGG----CGG----ATTCAACA-CTAAAGTTCTT-CCAACTC 2101 || || ||||| ||| | |||| | | | |||| ||| || Sbjct 105697 ACGAACACTTGAACCACTTGGCTTACGGTGCTGCTAAACACCCATTGGTCTTGCCAGTTC 105756 Query 2102 CAATGATGAACATCATCAACGGTGGTTCTCACTCAGACGCTCCAATCGCTTTCCAAGAAT 2161 || | ||||| | | ||||||||||| ||| | | | | | | ||||| ||||||| Sbjct 105757 CATTCTTGAACGTTTTGAACGGTGGTTCCCACGCTGGTGGTGCTTTGGCTTTGCAAGAAT 105816 Query 2162 TTATGATTGTACCTGCTGGTGCACCAACATTCAAAGAAGCGCTTCGTTGGGGTGCTGAAA 2221 ||||||||| || ||||||| ||| | ||| ||||| | | ||| ||||| Sbjct 105817 TTATGATTGCTCCAACTGGTGCTCCATCTTTCTCTGAAGCTTTGAGAATCGGTTCTGAAG 105876 Query 2222 TCTTCCACGCGCTTAAGAAAATCCTT------AAAGAA----CGTGG----ACTTGAAAC 2267 | | |||| | ||| ||||| || |||||| |||| || | || Sbjct 105877 TTTACCAC-CACTT---GAAATCTTTGACCAAAAAGAAATACGGTGGTTCCGCTGGTAA- 105931 Query 2268 AGCCGTAGGTGACGAAGGTGGTTTCGCACCTCGTTTCGACGGAACTGAAGATGGTGTTGA 2327 ||| ||||||||||||||| | || || | || || ||||||| | | | || Sbjct 105932 ---CGTCGGTGACGAAGGTGGTGTTGCTCCAGATATCAACACTGCTGAAGAAGCTTTGGA 105988 Query 2328 AACTATCATCAAAGCTATCGAAGCTGCTGGATATGTACCAGGTAAAGACGTATTTATCGG 2387 ||||| | |||||| ||||||| || || | |||| || || || || Sbjct 105989 CTTGATCATGGACGCTATCAAAGCTGCCGGTTACG---AAGGTCAA---GTTGACATTGG 106042 Query 2388 ACTTGACTGTGCATCATCTGAATTCTACGATGCAGAACGTAAAGTTTACGACT 2440 | || ||||| || |||||||||||| | ||| ||||| ||||||| Sbjct 106043 TATGGATTGTGCTTCTTCTGAATTCTACAA---AGACGGTAAA---TACGACT 106089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156037026959604