Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[genbank_20GCA_5F002151565.1_202017-05-19] 7 sequences; 10,682,662 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq6 150 1e-31 seq3 123 2e-23 >seq6 Length=2601250 Score = 150 bits (166), Expect = 1e-31 Identities = 575/885 (65%), Gaps = 26/885 (3%) Strand=Plus/Plus Query 61042 GAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGC--GCATGT 61099 |||||| |||||||| || | ||||| ||| |||| | || |||||| |||| | Sbjct 1393758 GAGAATAAGCGTCGTTTTGTTCTCTTCCCAATCAAGTACCATGAGATTTGGGAAGCATAT 1393817 Query 61100 ACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGA 61159 | | | ||| ||||| || |||||||| | || || ||||||||||||| || || Sbjct 1393818 A--AGAGGGCCGAAGCGTCTTTCTGGACTGCAGAAGAAATCGATTTGTCCAAGGATTTGC 1393875 Query 61160 ATGACTGGGAGCGTTTATCGAGCGGTGAACAACA----TTTCAT-TAAACATGTGTTGGC 61214 | || ||| | | || | |||| | | ||| || | | | | ||||| Sbjct 1393876 ACGATTGGAACAACAGAATGAATGA-GAACGAAAGGTTTTTTATCTCTAGAATT-TTGGC 1393933 Query 61215 GTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGA 61274 |||||| || || ||||| |||||||| || || || || |||| ||| | || Sbjct 1393934 GTTCTTCGCTGCCTCGGATGGTATCGTTAACGAAAACTTGGTGGAGAACTTCTCAGCTGA 1393993 Query 61275 GGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCA 61334 ||||||| | || ||| |||||||| || ||||| ||| ||||||||| |||| Sbjct 1393994 AGTGCAAGCACCAGAAGCGAAATGTTTCTATGGGTTCCAAATTATGATGGAGAATATCCA 1394053 Query 61335 CTCGGAGA--TGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAA 61392 || |||| | | | ||| | || ||||| || || | ||| | |||| |||| Sbjct 1394054 TTCAGAGACTTATTCCTTGT--TGATTGATACCTATATTAAGGATCCAAAGGAAAGTGAG 1394111 Query 61393 CGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTC 61452 ||||||||||| ||||| || || || | || || || || ||||| || Sbjct 1394112 TTTTTGTTCAATGCTATCGAAACTATCCCACAAATTAAAGAAAAGGCTGAATGGGCTATC 1394171 Query 61453 AATTGGA-TCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGT 61511 | |||| ||| | | | | || ||||||||| ||||| | || || || | || Sbjct 1394172 AGATGGATTCAAGATGATGATGCCT-TGTTTGGTGAAAGATTGGTTGCTTTCGCTGCTGT 1394230 Query 61512 CGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACT 61571 || ||||| || ||| || || ||||| || ||||| ||||||||||| || | Sbjct 1394231 GGAAGGTGTGTTCTTCTCCGGTTCCTTTGCTGCTATCTTCTGGTTGAAGAAGAAGGGGTT 1394290 Query 61572 TATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGA 61631 ||||| ||| |||| ||| || |||||||| | | || || || | ||| || Sbjct 1394291 AATGCCTGGTTTGACTTTCTCTAACGAGTTGATCTGTAGAGATGAAGGTCTACATACAGA 1394350 Query 61632 TTTTG-CTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGG 61690 |||| |||| ||| || | || || |||| || || ||||| Sbjct 1394351 CTTTGCCTGT----CTACTCTTTGCCCATTTGAAGAATAAACCAAATCCAGAAATTGTGG 1394406 Query 61691 GTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCG 61750 |||| || || || || || ||| || || | | || ||| | |||| Sbjct 1394407 AAAAGATCATTACAGAAGCTGTCGAAATTGAAAAGAGATACTTCATGGATGCTCTACCCG 1394466 Query 61751 TCTCACTCATCGGCATGAATTGTGGAC-TAATGTCGCAGTATATTGAATTTGTTGCCGAC 61809 | || || | || ||||| | ||| ||||| || || | |||||||| |||||| Sbjct 1394467 TTTCTCTATTGGGTATGAA-CGCAGACTTAATGAACCAATACGTGGAATTTGTCGCCGAC 1394525 Query 61810 CGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTAT-AATACGAAAAACCCATTTGATTT 61868 | | ||||||| ||||||| ||| || | | ||| | |||||||| ||||| Sbjct 1394526 AGATTATTGGTCGCCTTGGGTAACAAG-AAATATTTCAATGTCACCAACCCATTCGATTT 1394584 Query 61869 CATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913 |||||| | || || ||| ||| ||||| || |||||||| || Sbjct 1394585 CATGGAAAATATCTCCTTGGCTGGTAAGACCAACTTTTTCGAAAA 1394629 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/226 (69%), Gaps = 4/226 (2%) Strand=Plus/Minus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTG--CTCGTTGCTCCTCA 66397 |||||| |||||||||||||||||||| || || | ||| | || ||| || ||||| Sbjct 110349 CATAAAGAGATCAGGTATCCAGAGGGCATAAAACAAATCTCTTGCCCTCATT--TCCTCT 110292 Query 66398 ATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGG 66457 |||| ||||| || | || | | ||| |||| ||||| |||||||| || |||| Sbjct 110291 TTGCCATGATTCTTTCTCAGTTGCAAGAAGTCAATTATGTCTGCATGCCAGGGCTCCAAA 110232 Query 66458 TAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTG 66517 || || ||| | || | ||| |||||||| || || || | || || Sbjct 110231 TATATACAGAATGCTCCTGGTCTTTTATTTCCACCTTGATCAACATACCTGGCAGTGTTA 110172 Query 66518 TTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGG 66563 ||||| || | ||||| || || || || || ||| | || |||| Sbjct 110171 TTGAAAACCCTTAACATTGGCACAAGGCCATTGGATGTTCCGTTGG 110126 >seq3 Length=1752996 Score = 123 bits (136), Expect = 2e-23 Identities = 333/501 (66%), Gaps = 20/501 (4%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||||| || || || || ||| || || || | || || || |||||||| || || Sbjct 675418 ATCGATAGTAAATTGAATTGCAGCAGATGCAGCTTGTGTTCTTAGGTAGTACATACCAGT 675477 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGC-ATAATTCG-GC 65194 ||| | || ||| | ||||||||||| || | ||| || | || || | || Sbjct 675478 CTTCAAACCCTTTTTCCATCCGTAGAAATGCATGGAAGTTAACTTACCCATGGTTGGTGC 675537 Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254 || | ||| ||||| || || ||| ||||| |||||| | |||| || || ||| Sbjct 675538 ACGA--ATATGGATATTTAAGGATTGAGATTGATCAATGTAAGCAGCACGGTCGGCCGCC 675595 Query 65255 ATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCA 65314 ||||| || ||| | | || | ||||| || |||||||| ||| | | ||| Sbjct 675596 ATGTCGATAATATGCTTTTGAGACAATTCCCAAACAGTCTTGTATAGG-----TCCTTCA 675650 Query 65315 ATT-----GGAATCTCCTCAATGTCCTGGACTGAACCAC-GACGTGCAATAAT--GCGAT 65366 ||| || || | | || ||| | |||||| | || |||||||| | ||| Sbjct 675651 ATTCTTGTGGGATATTTGGTAAGTTCTGAATGGAACCATTGTCG-GCAATAATATGAGAT 675709 Query 65367 TACGCATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGA 65426 | | || | || ||| | |||||| || | | | || | |||| | |||| Sbjct 675710 TTC--ATAGCTTCATCCCAAATACCCAAGTCAACCAAGTCATGCAATAAGTATGGGTTGA 675767 Query 65427 TGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAA 65486 | ||||||||| || |||| |||||||| || |||||||| ||| ||||||| Sbjct 675768 CAATTTGGAACTCACCAGACAAAACACGACGAGAGTACATGTTGGATGTGTATGGTTCAA 675827 Query 65487 AGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACA 65546 | |||| ||| || | |||||| | || ||||| |||||||| ||||| ||||||| Sbjct 675828 AACATTCGTTGTAACCCAAAATTTGAGATGTGGATGCTGTTGGCATTGGAGCAACCAACA 675887 Query 65547 ATGAGTTTCGCAATCCGTTCA 65567 ||||||||| || || |||| Sbjct 675888 ATGAGTTTCTCATACCATTCA 675908 Score = 114 bits (126), Expect = 1e-20 Identities = 386/599 (64%), Gaps = 4/599 (1%) Strand=Plus/Plus Query 66052 ATACTCGACAATTTCGGTGCACAGATTACTGCAGCGT--ATGGTGCCCAAATTCTGTTGA 66109 ||| ||||||||||| |||| || || || | ||||| |||| |||| |||| Sbjct 676387 ATATTCGACAATTTCACAACACAAGTT--TGAAGACTTAATGGTACCCAGGTTCTTTTGA 676444 Query 66110 TTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGG 66169 || ||||| || || ||||||||||| | |||| ||||||| || || || ||| Sbjct 676445 TTGCTCTTCAAGTTACAAGCATCCTTGTAAAGCATGAACGGAGTACCTGTTTCTGTTTGC 676504 Query 66170 GACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTG 66229 | || | ||| || | ||| | | ||||| || || | | | ||||| Sbjct 676505 GCTTCCAAGATAGCATACCATAATTTTTGGGCCTTAACGGTTTTTCTACCACGACCTTCT 676564 Query 66230 CGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGA 66289 | ||||||| |||| || | | ||| || |||||| | | || | | || ||| Sbjct 676565 CTTTCGTAACGTTCATACATTTCTTCAAATTCTTCACCGTAAGCGTCAGGTAAACCGGGA 676624 Query 66290 CACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGA 66349 | | ||| | | || | ||| || | || ||| || | ||| || | | Sbjct 676625 GCTTCATTAGGAGAGAACAAGGTCCAGTCCTGGTTCTTTTCCACTCTCTTCATGAACAAA 676684 Query 66350 TCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTT 66409 ||||| ||||| | || ||| | ||| | || || || || | || ||||| Sbjct 676685 TCAGGAATCCACAATGCAGGGAATAAATCTCTAGCACGAATTTCTTCCTTTCCATGATTC 676744 Query 66410 TTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAAC 66469 || | | || | ||| || ||||| || | |||||||||||| | ||| | ||||| Sbjct 676745 TTCCTGATATCAATGAAATCGAAGATATCAGAATGCCATGGTTCAATGTATAAAGCGAAG 676804 Query 66470 GAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGC 66529 | || | ||| ||||||||||| ||||| ||||| |||||||||||||| Sbjct 676805 GCACCTGGTCTCTTGTTACCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAGACACGG 676864 Query 66530 AACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCC 66589 | ||| || | || || ||||| | || ||||| || | ||| || || | Sbjct 676865 ATCATTGGAATGATACCATTAGAAGTTCCGTTGGTACCAGCAATGTAAGAACCAGTAGAA 676924 Query 66590 CGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATC 66648 || || | ||||| | || ||||||||||| || ||||| ||||| |||||| || Sbjct 676925 CGGATGTTGTGAATGTGCAACCCAATACCACCAGCAGTCTTTGAGATCATAGCACATTC 676983 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567966082480