Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20lactis_20[refseq_20GCF_5F000002515.2_202004-07-02] 7 sequences; 10,729,447 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq6 150 1e-31 seq3 123 2e-23 >seq6 Length=2602197 Score = 150 bits (166), Expect = 1e-31 Identities = 575/885 (65%), Gaps = 26/885 (3%) Strand=Plus/Plus Query 61042 GAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGC--GCATGT 61099 |||||| |||||||| || | ||||| ||| |||| | || |||||| |||| | Sbjct 1393961 GAGAATAAGCGTCGTTTTGTTCTCTTCCCAATCAAGTACCATGAGATTTGGGAAGCATAT 1394020 Query 61100 ACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGA 61159 | | | ||| ||||| || |||||||| | || || ||||||||||||| || || Sbjct 1394021 A--AGAGGGCCGAAGCGTCTTTCTGGACTGCAGAAGAAATCGATTTGTCCAAGGATTTGC 1394078 Query 61160 ATGACTGGGAGCGTTTATCGAGCGGTGAACAACA----TTTCAT-TAAACATGTGTTGGC 61214 | || ||| | | || | |||| | | ||| || | | | | ||||| Sbjct 1394079 ACGATTGGAACAACAGAATGAATGA-GAACGAAAGGTTTTTTATCTCTAGAATT-TTGGC 1394136 Query 61215 GTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGA 61274 |||||| || || ||||| |||||||| || || || || |||| ||| | || Sbjct 1394137 GTTCTTCGCTGCCTCGGATGGTATCGTTAACGAAAACTTGGTGGAGAACTTCTCAGCTGA 1394196 Query 61275 GGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCA 61334 ||||||| | || ||| |||||||| || ||||| ||| ||||||||| |||| Sbjct 1394197 AGTGCAAGCACCAGAAGCGAAATGTTTCTATGGGTTCCAAATTATGATGGAGAATATCCA 1394256 Query 61335 CTCGGAGA--TGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAA 61392 || |||| | | | ||| | || ||||| || || | ||| | |||| |||| Sbjct 1394257 TTCAGAGACTTATTCCTTGT--TGATTGATACCTATATTAAGGATCCAAAGGAAAGTGAG 1394314 Query 61393 CGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTC 61452 ||||||||||| ||||| || || || | || || || || ||||| || Sbjct 1394315 TTTTTGTTCAATGCTATCGAAACTATCCCACAAATTAAAGAAAAGGCTGAATGGGCTATC 1394374 Query 61453 AATTGGA-TCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGT 61511 | |||| ||| | | | | || ||||||||| ||||| | || || || | || Sbjct 1394375 AGATGGATTCAAGATGATGATGCCT-TGTTTGGTGAAAGATTGGTTGCTTTCGCTGCTGT 1394433 Query 61512 CGAGGGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACT 61571 || ||||| || ||| || || ||||| || ||||| ||||||||||| || | Sbjct 1394434 GGAAGGTGTGTTCTTCTCCGGTTCCTTTGCTGCTATCTTCTGGTTGAAGAAGAAGGGGTT 1394493 Query 61572 TATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGA 61631 ||||| ||| |||| ||| || |||||||| | | || || || | ||| || Sbjct 1394494 AATGCCTGGTTTGACTTTCTCTAACGAGTTGATCTGTAGAGATGAAGGTCTACATACAGA 1394553 Query 61632 TTTTG-CTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGG 61690 |||| |||| ||| || | || || |||| || || ||||| Sbjct 1394554 CTTTGCCTGT----CTACTCTTTGCCCATTTGAAGAATAAACCAAATCCAGAAATTGTGG 1394609 Query 61691 GTGAGATTGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCG 61750 |||| || || || || || ||| || || | | || ||| | |||| Sbjct 1394610 AAAAGATCATTACAGAAGCTGTCGAAATTGAAAAGAGATACTTCATGGATGCTCTACCCG 1394669 Query 61751 TCTCACTCATCGGCATGAATTGTGGAC-TAATGTCGCAGTATATTGAATTTGTTGCCGAC 61809 | || || | || ||||| | ||| ||||| || || | |||||||| |||||| Sbjct 1394670 TTTCTCTATTGGGTATGAA-CGCAGACTTAATGAACCAATACGTGGAATTTGTCGCCGAC 1394728 Query 61810 CGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTAT-AATACGAAAAACCCATTTGATTT 61868 | | ||||||| ||||||| ||| || | | ||| | |||||||| ||||| Sbjct 1394729 AGATTATTGGTCGCCTTGGGTAACAAG-AAATATTTCAATGTCACCAACCCATTCGATTT 1394787 Query 61869 CATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913 |||||| | || || ||| ||| ||||| || |||||||| || Sbjct 1394788 CATGGAAAATATCTCCTTGGCTGGTAAGACCAACTTTTTCGAAAA 1394832 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/226 (69%), Gaps = 4/226 (2%) Strand=Plus/Minus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTG--CTCGTTGCTCCTCA 66397 |||||| |||||||||||||||||||| || || | ||| | || ||| || ||||| Sbjct 110215 CATAAAGAGATCAGGTATCCAGAGGGCATAAAACAAATCTCTTGCCCTCATT--TCCTCT 110158 Query 66398 ATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGG 66457 |||| ||||| || | || | | ||| |||| ||||| |||||||| || |||| Sbjct 110157 TTGCCATGATTCTTTCTCAGTTGCAAGAAGTCAATTATGTCTGCATGCCAGGGCTCCAAA 110098 Query 66458 TAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTG 66517 || || ||| | || | ||| |||||||| || || || | || || Sbjct 110097 TATATACAGAATGCTCCTGGTCTTTTATTTCCACCTTGATCAACATACCTGGCAGTGTTA 110038 Query 66518 TTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGG 66563 ||||| || | ||||| || || || || || ||| | || |||| Sbjct 110037 TTGAAAACCCTTAACATTGGCACAAGGCCATTGGATGTTCCGTTGG 109992 >seq3 Length=1753957 Score = 123 bits (136), Expect = 2e-23 Identities = 333/501 (66%), Gaps = 20/501 (4%) Strand=Plus/Plus Query 65077 ATCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGT 65136 ||||| || || || || ||| || || || | || || || |||||||| || || Sbjct 693791 ATCGATAGTAAATTGAATTGCAGCAGATGCAGCTTGTGTTCTTAGGTAGTACATACCAGT 693850 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGC-ATAATTCG-GC 65194 ||| | || ||| | ||||||||||| || | ||| || | || || | || Sbjct 693851 CTTCAAACCCTTTTTCCATCCGTAGAAATGCATGGAAGTTAACTTACCCATGGTTGGTGC 693910 Query 65195 TCGGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCC 65254 || | ||| ||||| || || ||| ||||| |||||| | |||| || || ||| Sbjct 693911 ACGA--ATATGGATATTTAAGGATTGAGATTGATCAATGTAAGCAGCACGGTCGGCCGCC 693968 Query 65255 ATGTCAATGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCA 65314 ||||| || ||| | | || | ||||| || |||||||| ||| | | ||| Sbjct 693969 ATGTCGATAATATGCTTTTGAGACAATTCCCAAACAGTCTTGTATAGG-----TCCTTCA 694023 Query 65315 ATT-----GGAATCTCCTCAATGTCCTGGACTGAACCAC-GACGTGCAATAAT--GCGAT 65366 ||| || || | | || ||| | |||||| | || |||||||| | ||| Sbjct 694024 ATTCTTGTGGGATATTTGGTAAGTTCTGAATGGAACCATTGTCG-GCAATAATATGAGAT 694082 Query 65367 TACGCATCGACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGA 65426 | | || | || ||| | |||||| || | | | || | |||| | |||| Sbjct 694083 TTC--ATAGCTTCATCCCAAATACCCAAGTCAACCAAGTCATGCAATAAGTATGGGTTGA 694140 Query 65427 TGACTTGGAACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAA 65486 | ||||||||| || |||| |||||||| || |||||||| ||| ||||||| Sbjct 694141 CAATTTGGAACTCACCAGACAAAACACGACGAGAGTACATGTTGGATGTGTATGGTTCAA 694200 Query 65487 AGGATTCAGTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACA 65546 | |||| ||| || | |||||| | || ||||| |||||||| ||||| ||||||| Sbjct 694201 AACATTCGTTGTAACCCAAAATTTGAGATGTGGATGCTGTTGGCATTGGAGCAACCAACA 694260 Query 65547 ATGAGTTTCGCAATCCGTTCA 65567 ||||||||| || || |||| Sbjct 694261 ATGAGTTTCTCATACCATTCA 694281 Score = 114 bits (126), Expect = 1e-20 Identities = 386/599 (64%), Gaps = 4/599 (1%) Strand=Plus/Plus Query 66052 ATACTCGACAATTTCGGTGCACAGATTACTGCAGCGT--ATGGTGCCCAAATTCTGTTGA 66109 ||| ||||||||||| |||| || || || | ||||| |||| |||| |||| Sbjct 694760 ATATTCGACAATTTCACAACACAAGTT--TGAAGACTTAATGGTACCCAGGTTCTTTTGA 694817 Query 66110 TTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGG 66169 || ||||| || || ||||||||||| | |||| ||||||| || || || ||| Sbjct 694818 TTGCTCTTCAAGTTACAAGCATCCTTGTAAAGCATGAACGGAGTACCTGTTTCTGTTTGC 694877 Query 66170 GACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTG 66229 | || | ||| || | ||| | | ||||| || || | | | ||||| Sbjct 694878 GCTTCCAAGATAGCATACCATAATTTTTGGGCCTTAACGGTTTTTCTACCACGACCTTCT 694937 Query 66230 CGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGA 66289 | ||||||| |||| || | | ||| || |||||| | | || | | || ||| Sbjct 694938 CTTTCGTAACGTTCATACATTTCTTCAAATTCTTCACCGTAAGCGTCAGGTAAACCGGGA 694997 Query 66290 CACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACGACGCATAAATAGA 66349 | | ||| | | || | ||| || | || ||| || | ||| || | | Sbjct 694998 GCTTCATTAGGAGAGAACAAGGTCCAGTCCTGGTTCTTTTCCACTCTCTTCATGAACAAA 695057 Query 66350 TCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTT 66409 ||||| ||||| | || ||| | ||| | || || || || | || ||||| Sbjct 695058 TCAGGAATCCACAATGCAGGGAATAAATCTCTAGCACGAATTTCTTCCTTTCCATGATTC 695117 Query 66410 TTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAAC 66469 || | | || | ||| || ||||| || | |||||||||||| | ||| | ||||| Sbjct 695118 TTCCTGATATCAATGAAATCGAAGATATCAGAATGCCATGGTTCAATGTATAAAGCGAAG 695177 Query 66470 GAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGC 66529 | || | ||| ||||||||||| ||||| ||||| |||||||||||||| Sbjct 695178 GCACCTGGTCTCTTGTTACCACCTTGGTCAACGTAACGAGCAGTGTTGTTGAAGACACGG 695237 Query 66530 AACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCC 66589 | ||| || | || || ||||| | || ||||| || | ||| || || | Sbjct 695238 ATCATTGGAATGATACCATTAGAAGTTCCGTTGGTACCAGCAATGTAAGAACCAGTAGAA 695297 Query 66590 CGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATC 66648 || || | ||||| | || ||||||||||| || ||||| ||||| |||||| || Sbjct 695298 CGGATGTTGTGAATGTGCAACCCAATACCACCAGCAGTCTTTGAGATCATAGCACATTC 695356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567966082480