Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq5 717 0.0 >seq5 Length=1351988 Score = 717 bits (794), Expect = 0.0 Identities = 561/665 (84%), Gaps = 34/665 (5%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| | |||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct 1164208 TGTAAAGTGCTTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 1164149 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||| Sbjct 1164148 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGA 1164089 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||| || | Sbjct 1164088 TGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCAT 1164029 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGT 262 | ||||| || || ||||| ||||| ||| || | Sbjct 1164028 TTGATCAGACATG---GCGTTTGCT-----------TCGGCT---------TTC-GCTG- 1163994 Query 263 CAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCC-CTTCGGG 321 |||||||||||| | ||||| ||||||| || |||||||||||| | |||||| Sbjct 1163993 --GGCCAGCATCAGTTTTAGCGGTTGGATAAAT-CCTCGGGAATGTGGCTCTGCTTCGGT 1163937 Query 322 GG-GTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGC 378 | ||||||||||||| || |||| | ||| || ||||||||| ||| | | | Sbjct 1163936 AGAGTGTTATAGCCCGTGG--GAATACAGCCAGCTGGGACTGAGGATTGCGACTTTTGTC 1163879 Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438 |||||||||||||||||||| | || |||||||||| ||||||||||||||||||||| Sbjct 1163878 AAGGATGCTGGCGTAATGGTTAAATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAA 1163819 Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 | ||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||| | Sbjct 1163818 CGTCTATGCGAGTGTTTGGGTGTAAAACCCGTACGCGTAATGAAAGTGAACGTAGGTGAG 1163759 Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1163758 GGCCCGCAAGGGTGCATCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 1163699 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1163698 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 1163639 Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 |||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||| Sbjct 1163638 CTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGG 1163579 Query 679 GGCGA 683 ||||| Sbjct 1163578 GGCGA 1163574 Score = 717 bits (794), Expect = 0.0 Identities = 561/665 (84%), Gaps = 34/665 (5%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| | |||||||||||||||||||||||||||||||||||| |||| ||||||| Sbjct 1172959 TGTAAAGTGCTTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 1172900 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||| Sbjct 1172899 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGA 1172840 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 ||||||| |||||| ||||||||| |||||| ||||||||||||||||||||||| || | Sbjct 1172839 TGAAAAGAACTTTGAAAAGAGAGTGAAAAAGTACGTGAAATTGTTGAAAGGGAAGGGCAT 1172780 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGT 262 | ||||| || || ||||| ||||| ||| || | Sbjct 1172779 TTGATCAGACATG---GCGTTTGCT-----------TCGGCT---------TTC-GCTG- 1172745 Query 263 CAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCC-CTTCGGG 321 |||||||||||| | ||||| ||||||| || |||||||||||| | |||||| Sbjct 1172744 --GGCCAGCATCAGTTTTAGCGGTTGGATAAAT-CCTCGGGAATGTGGCTCTGCTTCGGT 1172688 Query 322 GG-GTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGC 378 | ||||||||||||| || |||| | ||| || ||||||||| ||| | | | Sbjct 1172687 AGAGTGTTATAGCCCGTGG--GAATACAGCCAGCTGGGACTGAGGATTGCGACTTTTGTC 1172630 Query 379 TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438 |||||||||||||||||||| | || |||||||||| ||||||||||||||||||||| Sbjct 1172629 AAGGATGCTGGCGTAATGGTTAAATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAA 1172570 Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGG 498 | ||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||| | Sbjct 1172569 CGTCTATGCGAGTGTTTGGGTGTAAAACCCGTACGCGTAATGAAAGTGAACGTAGGTGAG 1172510 Query 499 AACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 558 |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1172509 GGCCCGCAAGGGTGCATCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGC 1172450 Query 559 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 618 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1172449 ATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAA 1172390 Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 |||||||||||||||| |||||||||| ||||||||||||||||| |||||||||||||| Sbjct 1172389 CTCTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGG 1172330 Query 679 GGCGA 683 ||||| Sbjct 1172329 GGCGA 1172325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079999806950