Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10-
03] 9 sequences; 10,895,581 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq5 392 6e-107
>seq5
Length=1351988
Score = 392 bits (434), Expect = 6e-107
Identities = 275/310 (89%), Gaps = 4/310 (1%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||||||||| |||||||| || || | || ||| | ||||||||
Sbjct 1165564 GAACGAGACCTTAACCTACTAAATAGGGTTGCTGGCACTTGCTGGTTAACT-CTTCTTAG 1165506
Query 80 AGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1165505 AGGGACTATCGGTTTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 1165446
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198
||| ||||||||||||||||||||||||||||| |||||| ||||| || |||||||||
Sbjct 1165445 AGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTACA--ACCTTGGCC 1165388
Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258
| |||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||
Sbjct 1165387 GAGAGGTCTGGGTAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGTAATTATT 1165328
Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318
||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||
Sbjct 1165327 GCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCT 1165268
Query 319 GCCCTTTGTA 328
||||||||||
Sbjct 1165267 GCCCTTTGTA 1165258
Score = 392 bits (434), Expect = 6e-107
Identities = 275/310 (89%), Gaps = 4/310 (1%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||||||||| |||||||| || || | || ||| | ||||||||
Sbjct 1174315 GAACGAGACCTTAACCTACTAAATAGGGTTGCTGGCACTTGCTGGTTAACT-CTTCTTAG 1174257
Query 80 AGGGACTATCGGCT-CAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1174256 AGGGACTATCGGTTTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 1174197
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198
||| ||||||||||||||||||||||||||||| |||||| ||||| || |||||||||
Sbjct 1174196 AGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGCCAGCGAGTACA--ACCTTGGCC 1174139
Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258
| |||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||
Sbjct 1174138 GAGAGGTCTGGGTAATCTTGTGAAACTCCGTCGTGCTGGGGATAGAGCATTGTAATTATT 1174079
Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318
||||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||
Sbjct 1174078 GCTCTTCAACGAGGAATTCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCT 1174019
Query 319 GCCCTTTGTA 328
||||||||||
Sbjct 1174018 GCCCTTTGTA 1174009
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947199914752
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |