Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10-
03] 9 sequences; 10,895,581 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq5 774 0.0
>seq5
Length=1351988
Score = 774 bits (858), Expect = 0.0
Identities = 498/539 (92%), Gaps = 6/539 (1%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1161792 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACATCTGCGTTATC 1161851
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1161852 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 1161911
Query 127 GGCCCGCGAAGGACCTT-AACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTG 185
||||| ||||| || || || |||| ||| |||| |||| ||||||| ||||
Sbjct 1161912 AGCCCGTATAGGACTTTGAATGCTAGAACGTGGAAAATGAATTCCAGCTCCGCTTAATTG 1161971
Query 186 ATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245
| |||||||| |||| |||| ||||||||||||||||| |||||||| ||||||||||
Sbjct 1161972 AATAAGTAAAGAAACTATAAAGGTAGTGGTATTTCACTGGCGCCGAA---GCTCCCACTT 1162028
Query 246 ATTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 304
|| ||||| ||||| | ||| ||||||| ||| |||||||||||||||||||||||||
Sbjct 1162029 ATGCTACACCCTCT-ATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCT 1162087
Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1162088 TCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 1162147
Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1162148 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 1162207
Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1162208 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 1162267
Query 485 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1162268 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 1162326
Score = 774 bits (858), Expect = 0.0
Identities = 498/539 (92%), Gaps = 6/539 (1%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1170543 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACATCTGCGTTATC 1170602
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1170603 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 1170662
Query 127 GGCCCGCGAAGGACCTT-AACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTG 185
||||| ||||| || || || |||| ||| |||| |||| ||||||| ||||
Sbjct 1170663 AGCCCGTATAGGACTTTGAATGCTAGAACGTGGAAAATGAATTCCAGCTCCGCTTAATTG 1170722
Query 186 ATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245
| |||||||| |||| |||| ||||||||||||||||| |||||||| ||||||||||
Sbjct 1170723 AATAAGTAAAGAAACTATAAAGGTAGTGGTATTTCACTGGCGCCGAA---GCTCCCACTT 1170779
Query 246 ATTCTACA-CCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCT 304
|| ||||| ||||| | ||| ||||||| ||| |||||||||||||||||||||||||
Sbjct 1170780 ATGCTACACCCTCT-ATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCT 1170838
Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 364
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1170839 TCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGA 1170898
Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1170899 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 1170958
Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1170959 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 1171018
Query 485 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1171019 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 1171077
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635199852832
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