Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10-
03] 9 sequences; 10,895,581 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq5 230 4e-58
>seq5
Length=1351988
Score = 230 bits (254), Expect = 4e-58
Identities = 232/293 (79%), Gaps = 18/293 (6%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| | | ||| || ||||||||||||||||||||||||||||||| |
Sbjct 1161468 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCATT 1161411
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct 1161410 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 1161351
Query 121 GAACGGGGTGA-TTCTCT--CCTGCACATCGTAGTCGGATACGAAT-AGGCTT------- 169
||||| | ||| |||| | | |||||| ||| |||||||||| |||| |
Sbjct 1161350 GAACGCGATGATTTCTTTGCCTTGCACAATATAGAAGGATACGAATAAGGCGTCTTTATG 1161291
Query 170 -CGGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTC 225
|| | | ||||| |||||||| |||||||| || |||||| || ||| |||
Sbjct 1161290 GCGTCGCTGAACCATAGCAGGCTGGCAACGGTGCTCTTAGCGGAAAGGCTTTGGGTGCT- 1161232
Query 226 AGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|| |||| |||||||| ||| |||||| ||||||||| |||| | |||||
Sbjct 1161231 TGCCGGCGAATTGCAATGTCATTTTGCGCAAGGATAAATCATTTGTATACGAC 1161179
Score = 230 bits (254), Expect = 4e-58
Identities = 232/293 (79%), Gaps = 18/293 (6%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||| | | ||| || ||||||||||||||||||||||||||||||| |
Sbjct 1170219 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCATT 1170162
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct 1170161 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 1170102
Query 121 GAACGGGGTGA-TTCTCT--CCTGCACATCGTAGTCGGATACGAAT-AGGCTT------- 169
||||| | ||| |||| | | |||||| ||| |||||||||| |||| |
Sbjct 1170101 GAACGCGATGATTTCTTTGCCTTGCACAATATAGAAGGATACGAATAAGGCGTCTTTATG 1170042
Query 170 -CGGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTC 225
|| | | ||||| |||||||| |||||||| || |||||| || ||| |||
Sbjct 1170041 GCGTCGCTGAACCATAGCAGGCTGGCAACGGTGCTCTTAGCGGAAAGGCTTTGGGTGCT- 1169983
Query 226 AGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|| |||| |||||||| ||| |||||| ||||||||| |||| | |||||
Sbjct 1169982 TGCCGGCGAATTGCAATGTCATTTTGCGCAAGGATAAATCATTTGTATACGAC 1169930
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819199928576
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |