Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq5 230 4e-58 >seq5 Length=1351988 Score = 230 bits (254), Expect = 4e-58 Identities = 232/293 (79%), Gaps = 18/293 (6%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | ||| || ||||||||||||||||||||||||||||||| | Sbjct 1161468 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCATT 1161411 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct 1161410 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 1161351 Query 121 GAACGGGGTGA-TTCTCT--CCTGCACATCGTAGTCGGATACGAAT-AGGCTT------- 169 ||||| | ||| |||| | | |||||| ||| |||||||||| |||| | Sbjct 1161350 GAACGCGATGATTTCTTTGCCTTGCACAATATAGAAGGATACGAATAAGGCGTCTTTATG 1161291 Query 170 -CGGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTC 225 || | | ||||| |||||||| |||||||| || |||||| || ||| ||| Sbjct 1161290 GCGTCGCTGAACCATAGCAGGCTGGCAACGGTGCTCTTAGCGGAAAGGCTTTGGGTGCT- 1161232 Query 226 AGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 || |||| |||||||| ||| |||||| ||||||||| |||| | ||||| Sbjct 1161231 TGCCGGCGAATTGCAATGTCATTTTGCGCAAGGATAAATCATTTGTATACGAC 1161179 Score = 230 bits (254), Expect = 4e-58 Identities = 232/293 (79%), Gaps = 18/293 (6%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| | | ||| || ||||||||||||||||||||||||||||||| | Sbjct 1170219 GTACGAGAGGAACAGTTCA-TTCGGA-TAATTGGTTTTTGCGGCTGTCTGACCAGGCATT 1170162 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct 1170161 GCCGCGAAGCTACCATCCGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCTA 1170102 Query 121 GAACGGGGTGA-TTCTCT--CCTGCACATCGTAGTCGGATACGAAT-AGGCTT------- 169 ||||| | ||| |||| | | |||||| ||| |||||||||| |||| | Sbjct 1170101 GAACGCGATGATTTCTTTGCCTTGCACAATATAGAAGGATACGAATAAGGCGTCTTTATG 1170042 Query 170 -CGGCCCCGAACCTTAGCAGGCCGGCAACGG-GCGTCCCGCGGAA--GCGCGGGGCGCTC 225 || | | ||||| |||||||| |||||||| || |||||| || ||| ||| Sbjct 1170041 GCGTCGCTGAACCATAGCAGGCTGGCAACGGTGCTCTTAGCGGAAAGGCTTTGGGTGCT- 1169983 Query 226 AGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 || |||| |||||||| ||| |||||| ||||||||| |||| | ||||| Sbjct 1169982 TGCCGGCGAATTGCAATGTCATTTTGCGCAAGGATAAATCATTTGTATACGAC 1169930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199928576