Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001417835.1_202014-10- 03] 9 sequences; 10,895,581 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq7 159 3e-34 seq3 125 6e-24 >seq7 Length=940253 Score = 159 bits (176), Expect = 3e-34 Identities = 539/837 (64%), Gaps = 2/837 (0%) Strand=Plus/Plus Query 66089 ATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTAC 66148 || || ||||| |||| |||||||||||| || || ||||||||||| | |||| | Sbjct 341302 ATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCCTTGTATAGCATGAAT 341361 Query 66149 GGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC 66208 || || || || || ||| | || | ||| |||| ||| | | ||||| || Sbjct 341362 GGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCTTGACA 341421 Query 66209 GTACGTACCGCC-CTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACC 66267 || | | | || | |||| | |||||| ||||||| | ||| || ||||| Sbjct 341422 GT-CTTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTCATCACC 341480 Query 66268 CCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTG 66327 | || || | | | ||| | || |||| | | || | |||||| | | || Sbjct 341481 GTAAACATCTGGTAAGCCTGGTGCTTCGTTTGGAGAGAACAAAGTCCAATCTTCGTTCTT 341540 Query 66328 TTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCG 66387 || || | ||| || ||||| || ||||| || || ||| | || | ||| || Sbjct 341541 CTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCTTGCACG 341600 Query 66388 TTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCA 66447 || || | ||||| || || | | ||||| ||| || ||||| || | ||||| Sbjct 341601 GATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGAGTGCCA 341660 Query 66448 TGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCG 66507 ||| || | ||| | |||||| | || | ||| ||||||||||| ||||| || Sbjct 341661 TGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAACGTAACG 341720 Query 66508 AGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 ||| |||||||| ||||| | ||| || | | |||||||| | || || || || Sbjct 341721 AGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTTAGTACC 341780 Query 66568 GTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGT 66627 | ||| || || | || || | ||||| | || |||||||||||| || || Sbjct 341781 AGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCGGT 341840 Query 66628 CTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTT 66687 ||| ||||| ||||| || || || | | || || |||||||| || |||| Sbjct 341841 CTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATGGAATCTTCCTT 341900 Query 66688 GATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGT 66747 |||| || ||| | ||||| | ||| || | || || | || ||| || || Sbjct 341901 CATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAAAAGTGT 341960 Query 66748 GGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATC 66807 || | |||||| || ||||| ||||||| ||||| || || | || || Sbjct 341961 TGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAACCTTTTC 342020 Query 66808 AATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGAC 66867 ||| | | || || || |||| || || ||| | | || |||||| ||||| | Sbjct 342021 AATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGACGTTCAGC 342080 Query 66868 CAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924 | | | | ||||| | ||||| || ||||||| |||||||| ||| ||||| Sbjct 342081 AACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAAGTA 342137 >seq3 Length=1564943 Score = 125 bits (138), Expect = 6e-24 Identities = 398/608 (65%), Gaps = 13/608 (2%) Strand=Plus/Plus Query 61051 CGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCG 61110 |||||||| || | ||||| ||| |||| | || || ||| || || | || Sbjct 415328 CGTCGTTTTGTGCTTTTCCCAATCAAGTACCACGAAATCTGGGAGGCTTATAAGAGAGCC 415387 Query 61111 GAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAG 61170 || || || || ||||| | || || ||||||||||||| || | |||||||| | Sbjct 415388 GAGGCCTCTTTTTGGACTGCTGAAGAAATCGATTTGTCCAAGGATCTTCATGACTGGAAC 415447 Query 61171 CGTTTATCGAGCGGTGAACAACA----TTTCAT-TAAACATGTGTTGGCGTTCTTTGCCG 61225 | || || |||| | | |||||| | | | ||| | ||||||||||| | Sbjct 415448 AACAGAATGAACGA-GAACGAGAGATTTTTCATCTCCAGA-GTGCTTGCGTTCTTTGCTG 415505 Query 61226 CTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGT 61285 |||| || |||||||| || || || || ||||| ||| | ||||||||| | Sbjct 415506 CTTCCGATGGTATCGTGAACGAAAACTTGGTGGAAAACTTCTCTGCTGAGGTGCAAATTC 415565 Query 61286 CGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGA--T 61343 | || || ||||||||||| ||||| ||| ||||| || ||||||| || | | Sbjct 415566 CAGAAGCCAAGTGTTTCTACGGTTTCCAAATTATGATGGAAAACATCCACTCCGAAACTT 415625 Query 61344 GTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAA 61403 | | ||| | || || || ||||||| ||| | ||||| || ||||| || Sbjct 415626 ATTCGTTGT--TGATTGACACTTACATCAAGGATCCTAAGGAACACGACTTCTTGTTGAA 415683 Query 61404 TGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGA-TCA 61462 |||||| || || || || | || || || | |||||| | | |||| || Sbjct 415684 TGCCATTGAAACCATTCCACAAATCAAAGAAAAGGCTCAATGGGCCATTAGATGGATTCG 415743 Query 61463 CCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTAT 61522 | || | || || | |||| ||||| | || || || | || || ||||| | Sbjct 415744 TGATGACGA-AGCCCTATACGCTGAAAGATTGGTTGCGTTCGCTGCCGTGGAAGGTGTGT 415802 Query 61523 TTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTC 61582 ||||| ||| || || || || ||||| ||||||||||| || | ||||| ||| Sbjct 415803 TTTTCTCTGGTTCCTTCGCTGCCATCTTCTGGTTGAAGAAGAAGGGTTTGATGCCAGGTT 415862 Query 61583 TGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTT 61642 |||||||| || || ||||| | | || || || |||| || ||||| || Sbjct 415863 TGACCTTCTCAAACGAATTGATTTGCAGAGATGAAGGTTTGCACACCGACTTTGCCTGTT 415922 Query 61643 TGCTATTC 61650 |||||||| Sbjct 415923 TGCTATTC 415930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567956391760