Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001660455.1_202016-06- 09] 84 sequences; 11,537,868 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq3 102 3e-16 seq5 86.0 2e-11 >seq3 Length=1617349 Score = 102 bits (112), Expect = 3e-16 Identities = 208/309 (67%), Gaps = 0/309 (0%) Strand=Plus/Minus Query 12736 ATCGTAAAAGAAAACTTTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACCAAT 12795 |||||| | ||||| ||||| || ||| || || | ||||| | ||||||||||| Sbjct 1058571 ATCGTAGTATAAAACATTCATACCAAGAGCTTCCGCCAAAACAGACAATTGAGAACCAAT 1058512 Query 12796 GTTACCATAACCTACTATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGAGAAGT 12855 | ||||||||| | ||||| |||||||| ||||||||||| | || | ||| Sbjct 1058511 ATGACCATAACCAATAATACCAAGGGTCTTACCTCTAACTTCCCAACATTTTGCAGAGAC 1058452 Query 12856 CTTGTTCCAAATGCCTTGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAAGATT 12915 ||||||||| | || |||||||| | |||||| || | || | || |||| | Sbjct 1058451 CTTGTTCCAGGTACCAGTATGTAGTTCGATAGATCTATCACCCAATTGTCTAGCAAGAGT 1058392 Query 12916 AATTAGTTGTCCTATGATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAATTAAA 12975 ||| | | | || | | ||||| ||| ||||| || | || || || || || Sbjct 1058391 AATAATCTCAGCGATAACCAATTCTGCAACGGATCTAGAATTTGAGAATGGGGAGTTGAA 1058332 Query 12976 GACTGCAATGCCTAGTTTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAATGCAGAA 13035 || | || ||| | |||| ||| | || |||| ||| || | |||||| ||||| Sbjct 1058331 CACAGAGATACCTTGCTTGGCAGCAAAATCAAGATCAACTTGGTTTGTACCAATACAGAA 1058272 Query 13036 GCATCCTAT 13044 || || || Sbjct 1058271 ACAGCCAAT 1058263 >seq5 Length=1432259 Score = 86.0 bits (94), Expect = 2e-11 Identities = 105/141 (74%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 364430 GTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGTCAGCG 364489 |||||||| || ||||| | ||||||| ||||| | || ||||| || || ||||| Sbjct 388578 GTCATACGGGAAGGAATAGCATGAGGGTTAATGATCAAATCTGGCACAATACCCTCAGCA 388637 Query 364490 GTAAAGGGCATATCTTCGGGA-GGAACGATGAGACCAATGGTTCCCTTTTGCGCATAGCG 364548 || || ||||||||||| | || | | | | ||||||||| |||||||| | | || Sbjct 388638 GTGAAAGGCATATCTTCCCTACGGTAAG-TAATACCAATGGTACCCTTTTGACCGTGACG 388696 Query 364549 AGAAGCAAACTTGTCGCCAAT 364569 || |||||||| || ||||| Sbjct 388697 GGATGCAAACTTATCTCCAAT 388717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884884371391012