Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07- 21] 1,096 sequences; 10,695,463 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq65 154 1e-32 seq582 120 2e-22 seq35 91.5 1e-13 >seq65 Length=9430 Score = 154 bits (170), Expect = 1e-32 Identities = 538/837 (64%), Gaps = 2/837 (0%) Strand=Plus/Plus Query 66089 ATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTAC 66148 || || ||||| |||| |||||||||||| || || ||||| ||||| | |||| | Sbjct 7003 ATAGTACCCAAGTTCTTTTGATTACTCTTCTTGTTACAAGCATCTTTGTATAGCATGAAT 7062 Query 66149 GGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC 66208 || || || || || ||| | || | ||| |||| ||| | | ||||| || Sbjct 7063 GGGGTACCAGTTTCGGTTTGAGCTTCCAAGATAGCGTACCACAACTTTTGAGCCTTGACA 7122 Query 66209 GTACGTACCGCC-CTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACC 66267 || | | | || | |||| | |||||| ||||||| | ||| || ||||| Sbjct 7123 GT-CTTTCTACCACGGCCTTCTCTCTCGTAACGTTCGTACAATGCTTCAAATTCATCACC 7181 Query 66268 CCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTG 66327 | || || | || | ||| | | |||| | | || | |||||| | | || Sbjct 7182 GTAAACATCTGGTAGGCCTGGTGCTTCATTTGGAGAGAACAAAGTCCAATCTTCGTTCTT 7241 Query 66328 TTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCG 66387 ||| || | ||| || ||||| || ||||| || || ||| | || | ||| || Sbjct 7242 TTCGACTCTCTTCATGAAAAGATCTGGGATCCATAGTGCTGGGAACAAGTCTCTTGCACG 7301 Query 66388 TTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCA 66447 || || | ||||| || || | | ||||| ||| || ||||| || | ||||| Sbjct 7302 GATTTCTTCCTTACCGTGGTTCTTTCTGATGTCGACGAAGTCGAAGATATCTGAGTGCCA 7361 Query 66448 TGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCG 66507 ||| || | ||| | |||||| | || | ||| ||||||||||| ||||| || Sbjct 7362 TGGCTCGATGTACAAGGCGAAGGCACCAGGTCTCTTGTTACCACCTTGGTCAACGTAACG 7421 Query 66508 AGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCC 66567 ||| |||||||| ||||| | ||| || | | |||||||| | || || || || Sbjct 7422 AGCAGTGTTGTTGAAAACACGAATCATTGGAATAATACCGTTAGAAGTACCGTTAGTACC 7481 Query 66568 GTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGT 66627 | ||| || || | || || | ||||| | || |||||||||||| || || Sbjct 7482 AGCAATGTAAGAACCGGTAGAACGAATGTTGTGAATGTGCAAACCAATACCACCAGCGGT 7541 Query 66628 CTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTT 66687 ||| ||||| ||||| || || || | | || || ||||| || || |||| Sbjct 7542 CTTAGAGATCATGGCACATTCCTTCAAAGTGTCGTAAATACCTTCAATCGAATCTTCCTT 7601 Query 66688 GATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGT 66747 |||| || ||| | ||||| | ||| || | || || | || ||| || || Sbjct 7602 CATGGCCACTAGGAAACATGATGACATTTGTGGATGAGGAGTACCAGCATTGAAAAGTGT 7661 Query 66748 GGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATC 66807 || | |||||| || ||||| ||||||| ||||| || || | || || Sbjct 7662 TGGCGAAGCGTGTGTGAAGTATCTTAGAGACATTAGGTTGTAAGTTTCCAAAACCTTTTC 7721 Query 66808 AATGTTTTCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGAC 66867 ||| | | || || || |||| || || ||| | | || |||||| ||||| | Sbjct 7722 AATATCTCTACCGTGGATACCGACAGCCACTCTCATGATCATGTGTTGAGGGCGTTCAGC 7781 Query 66868 CAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924 | | | | ||||| | ||||| || ||||||| |||||||| ||| ||||| Sbjct 7782 AACCTTACCGTTGATTCTTAGCAAGTAAGAACGTTCCAAGGTCTTGAAACCGAAGTA 7838 Score = 118 bits (130), Expect = 8e-22 Identities = 315/476 (66%), Gaps = 8/476 (2%) Strand=Plus/Plus Query 65084 GTGAACTGGATCGCATTAGCAGCCGCCTTGGTCCTAAGATAGTACATGCCGGTCTTGAGG 65143 ||||||||||| || || || || | || || ||||||||||| |||||||| | Sbjct 6004 GTGAACTGGATAGCGGCAGATGCAGCTTGAGTTCTTAGATAGTACATACCGGTCTTCAAA 6063 Query 65144 CCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGC-ATAATTCG-GCTCGGCCA 65201 || ||| | ||||||||||| || | || || | ||| || | || || | Sbjct 6064 CCCTTCTTCCATCCGTAGAAATGCATGGAAGTCAACTTACCCATAGTTGGAGCACGA--A 6121 Query 65202 CATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCATGTCAA 65261 || || |||||||| || |||||||||||| | |||| || || ||||| || | Sbjct 6122 TGTGAATGTTCAACGATTGGGATTGATCGATGTAAGCAGCACGGTCAGCGGCCATATCGA 6181 Query 65262 TGATACGACGTCCCGATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAATTGGAA 65321 | || | | |||||| ||||| || |||||||| | || ||| ||| | Sbjct 6182 TAATGTGCTTTTGCGATATTTCCCAAACAGTCTTGTATAAATCTTTTAGCTCTTGTGGGA 6241 Query 65322 TCTCCTCAATGTCCTGGACTGAACCACGACGTGCAATAAT--GCGATTACGCATCGACTC 65379 | | | || |||| |||||| | || || || | || | | || | || Sbjct 6242 TGTTTGGCAAGTTTTGGATAGAACCATTATCAGCGATGATATGGGACTTC--ATAGCTTC 6299 Query 65380 TGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGGAACTC 65439 ||| | ||||||||| | | || | | ||||| | | |||| || |||||| || Sbjct 6300 ATCCCAAATACCCAAATCAACCAAATCACGTAGCAAGTAAGGGTTGACGATTTGGAATTC 6359 Query 65440 GCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCAGTGTT 65499 || || | |||||||| || |||||||| ||| || || || | || ||| Sbjct 6360 ACCAGATAACACACGACGAGAGTACATGTTGGAAGTGTATGGCTCGAAACACTCGTTGTA 6419 Query 65500 GCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTTC 65555 || | |||||| | ||||| ||||||||||| ||||||| |||||| ||||||| Sbjct 6420 ACCCAAAATTTGAGATGTAGAAGCAGTTGGCATTGGAGCGAGCAACAAAGAGTTTC 6475 >seq582 Length=15002 Score = 120 bits (132), Expect = 2e-22 Identities = 397/609 (65%), Gaps = 15/609 (2%) Strand=Plus/Plus Query 61051 CGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCG 61110 |||||||| || | ||||| ||| |||| | || || ||| || || | || Sbjct 1331 CGTCGTTTTGTGCTTTTCCCAATCAAGTACCACGAAATCTGGGAAGCTTATAAGAGAGCC 1390 Query 61111 GAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAG 61170 || || || || ||||| | || || ||||||||||||| || | |||||||| | Sbjct 1391 GAGGCCTCTTTTTGGACTGCTGAAGAAATCGATTTGTCCAAGGATCTCCATGACTGGAAC 1450 Query 61171 CGTTTATCGAGCGGTGAACAACA----TTTCAT-TAAACATGTGTTGGCGTTCTTTGCCG 61225 | || || |||| | | |||||| | | | ||| | ||||||||||| | Sbjct 1451 AACAGAATGAACGA-GAACGAGAGATTTTTCATCTCCAGA-GTGCTTGCGTTCTTTGCTG 1508 Query 61226 CTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGT 61285 |||| || |||||||| || || || || ||||| ||| | ||||||||| | Sbjct 1509 CTTCCGATGGTATCGTGAACGAAAACTTGGTGGAAAACTTCTCCGCTGAGGTGCAAATTC 1568 Query 61286 CGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGA--T 61343 | || || || |||||||| ||||| ||| ||||| || | ||||| |||| | Sbjct 1569 CAGAAGCCAAGTGCTTCTACGGTTTCCAAATTATGATGGAAAACATTCACTCCGAGACTT 1628 Query 61344 GTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAA 61403 | | ||| | || || || ||||||| ||| | ||| | || ||||| || Sbjct 1629 ATTCGTTGT--TGATTGACACTTACATCAAGGATCCTAAGGAGCACGAGTTCTTGTTGAA 1686 Query 61404 TGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCAC 61463 |||||| || || || || | || || || | |||||| | | ||||| Sbjct 1687 TGCCATTGAAACCATTCCACAAATCAAAGAAAAGGCTCAATGGGCCATTAGATGGAT--T 1744 Query 61464 CAGTACAACG--GCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTA 61521 | || ||| ||| || || |||| ||||| | || || || | || || ||||| Sbjct 1745 CGTGACGACGAAGCTCTATATGCTGAAAGATTGGTTGCGTTCGCTGCCGTGGAAGGTGTG 1804 Query 61522 TTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGT 61581 |||||| ||| || || || || ||||| ||||||||||| || | ||||| ||| Sbjct 1805 TTTTTCTCTGGTTCCTTCGCTGCCATCTTCTGGTTGAAGAAGAAGGGTTTGATGCCAGGT 1864 Query 61582 CTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTT 61641 |||| ||| || || ||||| | | || || || |||| || ||||| | Sbjct 1865 TTGACATTCTCAAACGAATTGATTTGCAGAGATGAAGGTTTGCACACCGACTTTGCCTGT 1924 Query 61642 TTGCTATTC 61650 || |||||| Sbjct 1925 TTACTATTC 1933 >seq35 Length=84627 Score = 91.5 bits (100), Expect = 1e-13 Identities = 173/253 (68%), Gaps = 4/253 (2%) Strand=Plus/Plus Query 66311 GACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAG 66370 |||||||| ||| | ||| ||||| ||||||| ||||| || ||||| ||||| || Sbjct 61076 GACCAATCTTCATTATTTTCAACACGTTGCATAAAAAGATCCGGAATCCATAGGGCATAA 61135 Query 66371 AAGAGATCGCGTGC--TCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACT 66428 || | || || || || || || || | || ||||| || | | | | ||| | Sbjct 61136 AATAAGTCTCGGGCCCTCATTTCTTCTT--TTCCATGATTCTTTCTTAGTTGTAAGAAGT 61193 Query 66429 CAAAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGC 66488 ||| ||||| ||||||||||||||| ||| || || | || |||||| | Sbjct 61194 CAATAATGTCACCATGCCATGGTTCCAAGTATATACAAAAGGCACCGGGGCGTTTGTTCC 61253 Query 66489 CACCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGT 66548 ||||||||||||| || | || ||||| || || |||| ||| || || | || | Sbjct 61254 CACCTTGGTCGACATATCTTGCCGTGTTGTTAAAAACCCGCAGCATAGGCACTAAGCCAT 61313 Query 66549 TAGATTTGCCATT 66561 |||| | ||||| Sbjct 61314 TAGAAGTACCATT 61326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397562689485440