Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Kluyveromyces_20marxianus_20[genbank_20GCA_5F001692465.1_202016-07- 21] 1,096 sequences; 10,695,463 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq332 100 1e-15 seq281 86.0 2e-11 >seq332 Length=41165 Score = 100 bits (110), Expect = 1e-15 Identities = 234/353 (66%), Gaps = 0/353 (0%) Strand=Plus/Plus Query 12692 GTAGACACTTGCTTACTGTTGCCTAGAGGTAGTTTCTTGAGAACATCGTAAAAGAAAACT 12751 ||||| ||||| ||| | | |||||| | | | | || |||||| | || || Sbjct 36242 GTAGAAACTTGTTTAGCGGTACCTAGACTCATGATGGTAACAATATCGTAGTATAACACA 36301 Query 12752 TTCATGCCTAGACACTCTGCTAGGACAGAGACCTGAGAACCAATGTTACCATAACCTACT 12811 ||||| || ||| || |||| ||||| | ||||||||||| | ||||||||| | Sbjct 36302 TTCATACCAAGAGCTTCCGCTAAAACAGACAATTGAGAACCAATATGACCATAACCAATG 36361 Query 12812 ATACCTAGGGTCTTTCCTCTAACTTCACGGCAACCTTGAGAAGTCTTGTTCCAAATGCCT 12871 ||||| |||||||| ||||||||||| | || | ||| ||||||||| | || Sbjct 36362 ATACCAAGGGTCTTACCTCTAACTTCCCAACATTTTGCAGAGACCTTGTTCCAGGTACCA 36421 Query 12872 TGGTGTAGTTCTTTGTTTCTATCTCCAACCTGACGAGAAAGATTAATTAGTTGTCCTATG 12931 ||||||||| | |||||| || | || | || |||| | || | | | || Sbjct 36422 GTGTGTAGTTCGATAGATCTATCGCCTAATTGTCTAGCAAGAGTGATGATCTCAGCGATA 36481 Query 12932 ATGAGCTCTGCCACGCTTCTAGTGTTGCAAAAGGGAGAATTAAAGACTGCAATGCCTAGT 12991 | | ||||| ||| |||| || | || || || || || || | || ||| | Sbjct 36482 ACCAATTCTGCAACGGACCTAGAATTTGAGAATGGGGAGTTGAACACAGAGATACCTTGC 36541 Query 12992 TTGGTAGCCATGTCTAGATTAACCTGATCGTAACCAATGCAGAAGCATCCTAT 13044 |||| ||| | || |||| ||| || | |||||| ||||| || || || Sbjct 36542 TTGGCAGCAAAATCAAGATCAACTTGGTTTGTACCAATACAGAAACAACCAAT 36594 >seq281 Length=65337 Score = 86.0 bits (94), Expect = 2e-11 Identities = 105/141 (74%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 364430 GTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGTCAGCG 364489 |||||||| || ||||| | ||||||| ||||| | || ||||| || || || || Sbjct 59199 GTCATACGGGAAGGAATAGCATGAGGGTTAATGATCAAATCTGGCACAATACCCTCCGCA 59258 Query 364490 GTAAAGGGCATATCTTCGGGA-GGAACGATGAGACCAATGGTTCCCTTTTGCGCATAGCG 364548 || || ||||||||||| | || | | | | ||||||||| |||||||| | | || Sbjct 59259 GTGAAAGGCATATCTTCCCTACGGTAAG-TAATACCAATGGTACCCTTTTGACCGTGACG 59317 Query 364549 AGAAGCAAACTTGTCGCCAAT 364569 || ||||||||||| ||||| Sbjct 59318 GGATGCAAACTTGTCTCCAAT 59338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884859931482728