Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq11 87.8 3e-15
seq10 87.8 3e-15
seq9 87.8 3e-15
seq8 87.8 3e-15
seq7 87.8 3e-15
seq6 87.8 3e-15
seq5 87.8 3e-15
seq4 87.8 3e-15
seq3 87.8 3e-15
seq1 87.8 3e-15
>seq11
Length=14662
Score = 87.8 bits (96), Expect = 3e-15
Identities = 90/113 (80%), Gaps = 5/113 (4%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || | |||||||||| ||||| ||||| | ||||
Sbjct 5728 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 5784
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
|| ||| ||||| || | ||| |||||||||||||||||||||||||||
Sbjct 5785 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 5835
Score = 87.8 bits (96), Expect = 3e-15
Identities = 90/113 (80%), Gaps = 5/113 (4%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || | |||||||||| ||||| ||||| | ||||
Sbjct 13109 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 13165
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
|| ||| ||||| || | ||| |||||||||||||||||||||||||||
Sbjct 13166 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 13216
>seq10
Length=27792
Score = 87.8 bits (96), Expect = 3e-15
Identities = 90/113 (80%), Gaps = 5/113 (4%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || | |||||||||| ||||| ||||| | ||||
Sbjct 9845 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 9789
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
|| ||| ||||| || | ||| |||||||||||||||||||||||||||
Sbjct 9788 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 9738
Score = 87.8 bits (96), Expect = 3e-15
Identities = 90/113 (80%), Gaps = 5/113 (4%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || | |||||||||| ||||| ||||| | ||||
Sbjct 16924 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 16868
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
|| ||| ||||| || | ||| |||||||||||||||||||||||||||
Sbjct 16867 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 16817
Score = 87.8 bits (96), Expect = 3e-15
Identities = 90/113 (80%), Gaps = 5/113 (4%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || | |||||||||| ||||| ||||| | ||||
Sbjct 24003 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 23947
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
|| ||| ||||| || | ||| |||||||||||||||||||||||||||
Sbjct 23946 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 23896
>seq9
Length=30993
Score = 87.8 bits (96), Expect = 3e-15
Identities = 90/113 (80%), Gaps = 6/113 (5%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| | |||||||||||| ||||| ||||| | ||||
Sbjct 6361 GTACGAGAGGAACCGTTCA-TTCG--ACAATTGGTTTTTGGGGCTGCCTGACAAAGCAG- 6416
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
|| ||| ||||| || | ||| |||||||||||||||||||||||||||
Sbjct 6417 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 6467
Score = 87.8 bits (96), Expect = 3e-15
Identities = 90/113 (80%), Gaps = 5/113 (4%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || | |||||||||| ||||| ||||| | ||||
Sbjct 13785 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 13841
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
|| ||| ||||| || | ||| |||||||||||||||||||||||||||
Sbjct 13842 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 13892
Score = 87.8 bits (96), Expect = 3e-15
Identities = 90/113 (80%), Gaps = 5/113 (4%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || | |||||||||| ||||| ||||| | ||||
Sbjct 21228 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 21284
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
|| ||| ||||| || | ||| |||||||||||||||||||||||||||
Sbjct 21285 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 21335
>seq8
Length=27335
Score = 87.8 bits (96), Expect = 3e-15
Identities = 90/113 (80%), Gaps = 5/113 (4%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || | |||||||||| ||||| ||||| | ||||
Sbjct 6886 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 6942
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
|| ||| ||||| || | ||| |||||||||||||||||||||||||||
Sbjct 6943 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 6993
Score = 87.8 bits (96), Expect = 3e-15
Identities = 90/113 (80%), Gaps = 5/113 (4%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || | |||||||||| ||||| ||||| | ||||
Sbjct 14440 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 14496
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
|| ||| ||||| || | ||| |||||||||||||||||||||||||||
Sbjct 14497 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 14547
Score = 84.2 bits (92), Expect = 4e-14
Identities = 89/113 (79%), Gaps = 6/113 (5%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || |||||||||| ||||| ||||| | ||||
Sbjct 21977 GTACGAGAGGAACCGTTCA-TTCGACAT--TTGGTTTTTGGGGCTGCCTGACAAAGCAG- 22032
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
|| ||| ||||| || | ||| |||||||||||||||||||||||||||
Sbjct 22033 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 22083
>seq7
Length=16777
Score = 87.8 bits (96), Expect = 3e-15
Identities = 90/113 (80%), Gaps = 5/113 (4%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || | |||||||||| ||||| ||||| | ||||
Sbjct 1084 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 1140
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
|| ||| ||||| || | ||| |||||||||||||||||||||||||||
Sbjct 1141 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 1191
Score = 84.2 bits (92), Expect = 4e-14
Identities = 89/113 (79%), Gaps = 6/113 (5%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || | |||||||||| ||||| ||||| | ||||
Sbjct 8151 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 8207
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
| ||| ||||| || | ||| |||||||||||||||||||||||||||
Sbjct 8208 --CCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 8257
>seq6
Length=33297
Score = 87.8 bits (96), Expect = 3e-15
Identities = 90/113 (80%), Gaps = 5/113 (4%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || | |||||||||| ||||| ||||| | ||||
Sbjct 6397 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 6453
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
|| ||| ||||| || | ||| |||||||||||||||||||||||||||
Sbjct 6454 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 6504
Score = 87.8 bits (96), Expect = 3e-15
Identities = 90/113 (80%), Gaps = 5/113 (4%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || | |||||||||| ||||| ||||| | ||||
Sbjct 13840 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 13896
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
|| ||| ||||| || | ||| |||||||||||||||||||||||||||
Sbjct 13897 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 13947
Score = 87.8 bits (96), Expect = 3e-15
Identities = 90/113 (80%), Gaps = 5/113 (4%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || | |||||||||| ||||| ||||| | ||||
Sbjct 21387 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 21443
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
|| ||| ||||| || | ||| |||||||||||||||||||||||||||
Sbjct 21444 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 21494
Score = 84.2 bits (92), Expect = 4e-14
Identities = 89/113 (79%), Gaps = 6/113 (5%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || | |||||||||| ||||| ||||| | ||||
Sbjct 28934 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 28990
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
| ||| ||||| || | ||| |||||||||||||||||||||||||||
Sbjct 28991 --CCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 29040
>seq5
Length=28397
Score = 87.8 bits (96), Expect = 3e-15
Identities = 90/113 (80%), Gaps = 5/113 (4%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || | |||||||||| ||||| ||||| | ||||
Sbjct 15000 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 14944
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
|| ||| ||||| || | ||| |||||||||||||||||||||||||||
Sbjct 14943 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 14893
Score = 87.8 bits (96), Expect = 3e-15
Identities = 90/113 (80%), Gaps = 5/113 (4%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || | |||||||||| ||||| ||||| | ||||
Sbjct 22480 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 22424
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
|| ||| ||||| || | ||| |||||||||||||||||||||||||||
Sbjct 22423 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 22373
Score = 84.2 bits (92), Expect = 4e-14
Identities = 89/113 (79%), Gaps = 6/113 (5%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || | |||||||||| ||||| ||||| | ||||
Sbjct 7503 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 7447
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
| ||| ||||| || | ||| |||||||||||||||||||||||||||
Sbjct 7446 --CCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 7397
>seq4
Length=1577441
Score = 87.8 bits (96), Expect = 3e-15
Identities = 90/113 (80%), Gaps = 5/113 (4%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || | |||||||||| ||||| ||||| | ||||
Sbjct 3617 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 3673
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
|| ||| ||||| || | ||| |||||||||||||||||||||||||||
Sbjct 3674 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 3724
>seq3
Length=1828518
Score = 87.8 bits (96), Expect = 3e-15
Identities = 90/113 (80%), Gaps = 5/113 (4%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || | |||||||||| ||||| ||||| | ||||
Sbjct 1825671 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 1825615
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
|| ||| ||||| || | ||| |||||||||||||||||||||||||||
Sbjct 1825614 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 1825564
>seq1
Length=3325186
Score = 87.8 bits (96), Expect = 3e-15
Identities = 90/113 (80%), Gaps = 5/113 (4%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
||||||||||||||| | ||| || | |||||||||| ||||| ||||| | ||||
Sbjct 3417 GTACGAGAGGAACCGTTCA-TTCGGAC-ATTTGGTTTTTGGGGCTGCCTGACAAAGCAG- 3473
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATC 113
|| ||| ||||| || | ||| |||||||||||||||||||||||||||
Sbjct 3474 -CCCCGACGCTACG-TCCGTCAGATCATGGCTGAACGCCTCTAAGTCAGAATC 3524
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819199912704
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |