Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12] 11 sequences; 9,597,535 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1 199 3e-46 seq2 156 3e-33 >seq1 Length=3325186 Score = 199 bits (220), Expect = 3e-46 Identities = 727/1129 (64%), Gaps = 28/1129 (2%) Strand=Plus/Minus Query 65807 AAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGT 65866 |||| || || | ||||||||| |||| | | || || | || ||||| ||||| | Sbjct 2236383 AAAGCATCAGCTAAACCTTGAACACCAACAGCAATTGGTCTATTACGCATGTTGGATCTC 2236324 Query 65867 CTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACC 65926 || ||||| || || |||||||| || | |||||||| | ||||| || || || ||| Sbjct 2236323 CTAGCCTCTGGAACCGGGTAGTAGTTTCTGTCGATAATTCTGTTCAAGTTACGAGTGACC 2236264 Query 65927 ACATGCACGATACGTC--GCAATTGTTCGAAATCAAAATGTTTAGGACGATCGG-GAGTG 65983 || | | ||| ||| ||| | ||| || | ||| || | | | |||| Sbjct 2236263 ACCTTCGTGAT--GTCATGCAGCTTTTCAAAGT-----TGT-----ACCAACAGTGAGTA 2236216 Query 65984 CC---GGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCG 66040 | || | ||||| ||||| |||| ||| || | ||| |||||||| | || Sbjct 2236215 TCATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTTTCT 2236156 Query 66041 TCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAA 66100 || || | | |||||| ||||| || || || ||| | | ||| ||||| Sbjct 2236155 TCTGGGGAAGAATACTCAACAATCTCACAACAAAGGTTAGAGGATTTAATGACACCCAAG 2236096 Query 66101 TTCT----GTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCC 66156 |||| |||| || ||||| || || |||||||| |||| |||| | ||||| || Sbjct 2236095 TTCTTCTGGTTGGTTT-TCTTG---TTACAAGCATCCTTATACAACATGAATGGAGTACC 2236040 Query 66157 GGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTAC 66216 ||| || || | ||| | |||||||| |||||| | || || | || || Sbjct 2236039 GGTTTCTGTCTGTGCCTCGAGGATGGCGTACCAAAGCTTTTGGGCTTTGATGGTTTGTCT 2235980 Query 66217 CGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTC 66276 | | ||||| |||||| |||||| || | ||| || || || | || || Sbjct 2235979 TCCACGACCTTCCTTTTCGTATCTTTCGTACAGTTCTTCAAATTCATCGCCGTAGACGTC 2235920 Query 66277 GGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACG 66336 || || | ||| || |||| | | ||| | ||| || |||| |||||| || | Sbjct 2235919 GGCAAGGCCAGGAGCCTCACTTGGAGAGAACAGGGTCCATTCGCCATTCTGTTCGACCCT 2235860 Query 66337 ACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTC 66396 ||| || |||||||| ||||| || || ||| ||||| | |||| ||||| Sbjct 2235859 TTTCATGAACAGATCAGGGATCCATAGAGCCGGGAATAGATCTCTGGCTCTGATTTCCTC 2235800 Query 66397 AATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAG 66456 | || || || || || | ||| | || | |||||||| |||||||||||||||| Sbjct 2235799 TTTTCCATGGTTCTTACGAATGTCAATAAAGGCGAAGATGTCCGCATGCCATGGTTCCAA 2235740 Query 66457 GTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATT 66516 ||| | || || | || || ||| |||||||| || || || |||||| || Sbjct 2235739 GTACAAAGCAAATGCACCAGGGCGCTTGTTACCACCTTGATCAACATAACGAGCGGTGTT 2235680 Query 66517 GTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGG 66576 |||||| || | || ||| || | | ||||| || | || || || || | ||| Sbjct 2235679 GTTGAAAACTCTCACCATTGGAATAATACCGTTCGAAGTACCGTTAGTACCAGCAATGTA 2235620 Query 66577 GGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGAT 66636 ||||||| || || |||| |||| | || |||||| ||||| || || || || || Sbjct 2235619 GGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAAAT 2235560 Query 66637 GGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAG 66696 |||||| || || || | || || ||||| |||||| || |||| | Sbjct 2235559 TAAAGCACATTCCTTCAAAGTATCATAAATACCTTCAATCGAGTCATCCCGCATGGCAAC 2235500 Query 66697 GAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGC 66756 | | | ||||| | ||| || | || || | || || || || || | || Sbjct 2235499 TAAGAAACATGACGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGC 2235440 Query 66757 GTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTC 66816 ||| || || || | || ||| | ||||| || || || || |||||| || Sbjct 2235439 GTGAGTGAAATACTTCTGACTCATAAAGTTGTAGGTTTCAATAACCCTTGCAATGTCATC 2235380 Query 66817 GCCATGAATCCCGAGTGC-ACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGAT 66875 |||||||| |||| || ||| ||||| | | || |||||| ||||| | | Sbjct 2235379 ACCATGAATACCGATAGCGACA-CGCATAATTAAGTGTTGAGGACGTTCTGCAACATTGC 2235321 Query 66876 CCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924 | || || || | ||| || | ||||| |||||||| |||||||| Sbjct 2235320 CATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTA 2235272 >seq2 Length=2687137 Score = 156 bits (172), Expect = 3e-33 Identities = 566/872 (65%), Gaps = 18/872 (2%) Strand=Plus/Minus Query 61051 CGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCG 61110 ||||||||||| | ||||| | | ||| | || || |||| ||||||||| |||| Sbjct 443599 CGTCGTTTCGTTCTCTTCCCTTTGAAATATCACGACATCTGGCAAATGTACAAACAGGCC 443540 Query 61111 GAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAG 61170 ||||||||||| ||||| | ||||| | || ||| || || || |||||||| | Sbjct 443539 GAAGCTTCCTTTTGGACTGCCGAGGAAATAGACTTGGGAAAGGATTTGCATGACTGGAAT 443480 Query 61171 ---CGTTT-ATCGAGCGGTGAACAACATTTCAT-TAAACATGTGTTGGCGTTCTTTGCCG 61225 ||| | | ||| | ||| | |||| || | | | | ||| | || ||||| | Sbjct 443479 AATCGTATGAACGA-CAATGAGAAGTATTTTATCTCTAGAGTTCTTGCCTTT-TTTGCTG 443422 Query 61226 CTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTC-GCGCAGGAGGTGCAAGTG 61284 | || || ||||| |||||||| ||||| ||||| ||| |||| | |||| ||| | Sbjct 443421 CCTCTGATGGTATTGTCAATGAAAATTTGGTGGAAAACTTCAGCGCTG-AGGTTCAACTT 443363 Query 61285 TCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATG 61344 | || || ||||| ||||| || || || |||||||| ||||||| || | Sbjct 443362 CCCGAAGCAAAATGTTTTTACGGTTTTCAAATCATGATGGAGAACATCCACTCCGAAACT 443303 Query 61345 TAC--AGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCA 61402 ||| | |||| || ||||| ||||||| || | ||| ||| ||||||| Sbjct 443302 TACTCATTGTTG--ATTGATACTTACATCAAAGATCCAAAAGAATCCGAATTCTTGTTCA 443245 Query 61403 ATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCA 61462 ||||||||||||| || || | || || || || |||||| | | ||||| Sbjct 443244 ATGCCATCGAGACCATTCCATGTATCAAAGAAAAGGCTGACTGGGCCATGAGATGGATTG 443185 Query 61463 CC-AGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTA 61521 || | || | ||| || | |||||| ||| | || || || | || || ||| | Sbjct 443184 CCGATGACGA-TGCTTTGTTCGCTGAACGTTTGGTTGCCTTCGCTGCTGTTGAAGGTATC 443126 Query 61522 TTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGT 61581 || || || || || || | ||||| |||||||| || | || |||||||| ||| Sbjct 443125 TTCTTTTCGGGCTCTTTCGCTTCTATCTTCTGGTTGAAAAAGAGAGGTCTTATGCCAGGT 443066 Query 61582 CTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTT 61641 |||||||| ||||||| | || | | || || || | || || |||||| Sbjct 443065 TTGACCTTCTCCAATGAGCTTATTTGCAGAGATGAAGGATTACACACCGACTTTGCTTGC 443006 Query 61642 TTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTT 61701 ||||||||| | || || || | | ||||| || | ||||| || Sbjct 443005 TTGCTATTCTCTCACT---TGAACAACAGAGCCAGTGAGGAAATCGTTGAAAAGATTATT 442949 Query 61702 CGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATC 61761 ||||| || || ||| | || | || || ||| | || || || | | Sbjct 442948 ACAGAGGCTGTCGAGATTGAAAAAAGATACTTCACAGATGCTCTTCCTGTTTCCTTGCTG 442889 Query 61762 GGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTC 61821 || ||||| || | | |||| |||||| |||| || ||||| || | || |||| Sbjct 442888 GGAATGAACTGCAGCTTGATGTGCCAGTATGTTGAGTTCGTTGCTGATAGACTACTGGTA 442829 Query 61822 GATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATT 61881 | | |||| | || | || || | || ||||||||||||||||| | ||| Sbjct 442828 GCTCTGGGCAACAAAAAAGTGTACAACGTCACCAATCCATTTGATTTCATGGAGAACATT 442769 Query 61882 TCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913 || ||| ||| ||||| || || ||||| || Sbjct 442768 TCTTTGGCTGGTAAGACCAACTTCTTCGAAAA 442737 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567946701040