Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F001708105.1_202016-08-12]
11 sequences; 9,597,535 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq1 199 3e-46
seq2 156 3e-33
>seq1
Length=3325186
Score = 199 bits (220), Expect = 3e-46
Identities = 727/1129 (64%), Gaps = 28/1129 (2%)
Strand=Plus/Minus
Query 65807 AAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACGT 65866
|||| || || | ||||||||| |||| | | || || | || ||||| ||||| |
Sbjct 2236383 AAAGCATCAGCTAAACCTTGAACACCAACAGCAATTGGTCTATTACGCATGTTGGATCTC 2236324
Query 65867 CTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCACC 65926
|| ||||| || || |||||||| || | |||||||| | ||||| || || || |||
Sbjct 2236323 CTAGCCTCTGGAACCGGGTAGTAGTTTCTGTCGATAATTCTGTTCAAGTTACGAGTGACC 2236264
Query 65927 ACATGCACGATACGTC--GCAATTGTTCGAAATCAAAATGTTTAGGACGATCGG-GAGTG 65983
|| | | ||| ||| ||| | ||| || | ||| || | | | ||||
Sbjct 2236263 ACCTTCGTGAT--GTCATGCAGCTTTTCAAAGT-----TGT-----ACCAACAGTGAGTA 2236216
Query 65984 CC---GGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCG 66040
| || | ||||| ||||| |||| ||| || | ||| |||||||| | ||
Sbjct 2236215 TCATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTTTCT 2236156
Query 66041 TCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAA 66100
|| || | | |||||| ||||| || || || ||| | | ||| |||||
Sbjct 2236155 TCTGGGGAAGAATACTCAACAATCTCACAACAAAGGTTAGAGGATTTAATGACACCCAAG 2236096
Query 66101 TTCT----GTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCC 66156
|||| |||| || ||||| || || |||||||| |||| |||| | ||||| ||
Sbjct 2236095 TTCTTCTGGTTGGTTT-TCTTG---TTACAAGCATCCTTATACAACATGAATGGAGTACC 2236040
Query 66157 GGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTAC 66216
||| || || | ||| | |||||||| |||||| | || || | || ||
Sbjct 2236039 GGTTTCTGTCTGTGCCTCGAGGATGGCGTACCAAAGCTTTTGGGCTTTGATGGTTTGTCT 2235980
Query 66217 CGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCCCATACTTC 66276
| | ||||| |||||| |||||| || | ||| || || || | || ||
Sbjct 2235979 TCCACGACCTTCCTTTTCGTATCTTTCGTACAGTTCTTCAAATTCATCGCCGTAGACGTC 2235920
Query 66277 GGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACACG 66336
|| || | ||| || |||| | | ||| | ||| || |||| |||||| || |
Sbjct 2235919 GGCAAGGCCAGGAGCCTCACTTGGAGAGAACAGGGTCCATTCGCCATTCTGTTCGACCCT 2235860
Query 66337 ACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTC 66396
||| || |||||||| ||||| || || ||| ||||| | |||| |||||
Sbjct 2235859 TTTCATGAACAGATCAGGGATCCATAGAGCCGGGAATAGATCTCTGGCTCTGATTTCCTC 2235800
Query 66397 AATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAG 66456
| || || || || || | ||| | || | |||||||| ||||||||||||||||
Sbjct 2235799 TTTTCCATGGTTCTTACGAATGTCAATAAAGGCGAAGATGTCCGCATGCCATGGTTCCAA 2235740
Query 66457 GTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACATT 66516
||| | || || | || || ||| |||||||| || || || |||||| ||
Sbjct 2235739 GTACAAAGCAAATGCACCAGGGCGCTTGTTACCACCTTGATCAACATAACGAGCGGTGTT 2235680
Query 66517 GTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATGGG 66576
|||||| || | || ||| || | | ||||| || | || || || || | |||
Sbjct 2235679 GTTGAAAACTCTCACCATTGGAATAATACCGTTCGAAGTACCGTTAGTACCAGCAATGTA 2235620
Query 66577 GGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAGAT 66636
||||||| || || |||| |||| | || |||||| ||||| || || || || ||
Sbjct 2235619 GGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAAAT 2235560
Query 66637 GGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTCAG 66696
|||||| || || || | || || ||||| |||||| || |||| |
Sbjct 2235559 TAAAGCACATTCCTTCAAAGTATCATAAATACCTTCAATCGAGTCATCCCGCATGGCAAC 2235500
Query 66697 GAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTAGC 66756
| | | ||||| | ||| || | || || | || || || || || | ||
Sbjct 2235499 TAAGAAACATGACGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAGGC 2235440
Query 66757 GTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTTTC 66816
||| || || || | || ||| | ||||| || || || || |||||| ||
Sbjct 2235439 GTGAGTGAAATACTTCTGACTCATAAAGTTGTAGGTTTCAATAACCCTTGCAATGTCATC 2235380
Query 66817 GCCATGAATCCCGAGTGC-ACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGAT 66875
|||||||| |||| || ||| ||||| | | || |||||| ||||| | |
Sbjct 2235379 ACCATGAATACCGATAGCGACA-CGCATAATTAAGTGTTGAGGACGTTCTGCAACATTGC 2235321
Query 66876 CCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924
| || || || | ||| || | ||||| |||||||| ||||||||
Sbjct 2235320 CATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTA 2235272
>seq2
Length=2687137
Score = 156 bits (172), Expect = 3e-33
Identities = 566/872 (65%), Gaps = 18/872 (2%)
Strand=Plus/Minus
Query 61051 CGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCG 61110
||||||||||| | ||||| | | ||| | || || |||| ||||||||| ||||
Sbjct 443599 CGTCGTTTCGTTCTCTTCCCTTTGAAATATCACGACATCTGGCAAATGTACAAACAGGCC 443540
Query 61111 GAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAG 61170
||||||||||| ||||| | ||||| | || ||| || || || |||||||| |
Sbjct 443539 GAAGCTTCCTTTTGGACTGCCGAGGAAATAGACTTGGGAAAGGATTTGCATGACTGGAAT 443480
Query 61171 ---CGTTT-ATCGAGCGGTGAACAACATTTCAT-TAAACATGTGTTGGCGTTCTTTGCCG 61225
||| | | ||| | ||| | |||| || | | | | ||| | || ||||| |
Sbjct 443479 AATCGTATGAACGA-CAATGAGAAGTATTTTATCTCTAGAGTTCTTGCCTTT-TTTGCTG 443422
Query 61226 CTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTC-GCGCAGGAGGTGCAAGTG 61284
| || || ||||| |||||||| ||||| ||||| ||| |||| | |||| ||| |
Sbjct 443421 CCTCTGATGGTATTGTCAATGAAAATTTGGTGGAAAACTTCAGCGCTG-AGGTTCAACTT 443363
Query 61285 TCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATG 61344
| || || ||||| ||||| || || || |||||||| ||||||| || |
Sbjct 443362 CCCGAAGCAAAATGTTTTTACGGTTTTCAAATCATGATGGAGAACATCCACTCCGAAACT 443303
Query 61345 TAC--AGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCA 61402
||| | |||| || ||||| ||||||| || | ||| ||| |||||||
Sbjct 443302 TACTCATTGTTG--ATTGATACTTACATCAAAGATCCAAAAGAATCCGAATTCTTGTTCA 443245
Query 61403 ATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCA 61462
||||||||||||| || || | || || || || |||||| | | |||||
Sbjct 443244 ATGCCATCGAGACCATTCCATGTATCAAAGAAAAGGCTGACTGGGCCATGAGATGGATTG 443185
Query 61463 CC-AGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTA 61521
|| | || | ||| || | |||||| ||| | || || || | || || ||| |
Sbjct 443184 CCGATGACGA-TGCTTTGTTCGCTGAACGTTTGGTTGCCTTCGCTGCTGTTGAAGGTATC 443126
Query 61522 TTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGT 61581
|| || || || || || | ||||| |||||||| || | || |||||||| |||
Sbjct 443125 TTCTTTTCGGGCTCTTTCGCTTCTATCTTCTGGTTGAAAAAGAGAGGTCTTATGCCAGGT 443066
Query 61582 CTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTT 61641
|||||||| ||||||| | || | | || || || | || || ||||||
Sbjct 443065 TTGACCTTCTCCAATGAGCTTATTTGCAGAGATGAAGGATTACACACCGACTTTGCTTGC 443006
Query 61642 TTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTT 61701
||||||||| | || || || | | ||||| || | ||||| ||
Sbjct 443005 TTGCTATTCTCTCACT---TGAACAACAGAGCCAGTGAGGAAATCGTTGAAAAGATTATT 442949
Query 61702 CGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATC 61761
||||| || || ||| | || | || || ||| | || || || | |
Sbjct 442948 ACAGAGGCTGTCGAGATTGAAAAAAGATACTTCACAGATGCTCTTCCTGTTTCCTTGCTG 442889
Query 61762 GGCATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTC 61821
|| ||||| || | | |||| |||||| |||| || ||||| || | || ||||
Sbjct 442888 GGAATGAACTGCAGCTTGATGTGCCAGTATGTTGAGTTCGTTGCTGATAGACTACTGGTA 442829
Query 61822 GATTTGGGTATGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATT 61881
| | |||| | || | || || | || ||||||||||||||||| | |||
Sbjct 442828 GCTCTGGGCAACAAAAAAGTGTACAACGTCACCAATCCATTTGATTTCATGGAGAACATT 442769
Query 61882 TCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913
|| ||| ||| ||||| || || ||||| ||
Sbjct 442768 TCTTTGGCTGGTAAGACCAACTTCTTCGAAAA 442737
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567946701040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |