Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900007755.1_202016-02-08] 177 sequences; 9,361,826 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq38 215 8e-54 seq96 163 4e-38 >seq38 Length=772 Score = 215 bits (238), Expect = 8e-54 Identities = 192/234 (82%), Gaps = 15/234 (6%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||| | Sbjct 426 GTACAAAGGGCAGGGACGTAATCAGCGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 483 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||| | | |||||| | ||||||||| ||||| | | | | |||||| Sbjct 484 CTCGTTGAAGCGCCTC--TTGCAAAGCGCTATCCCCAGCACGACGGAGTCT--AAGATTC 539 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| | | || | ||||| ||||| || | | |||||||||||||||||||| Sbjct 540 CCCGGCCATCTCTGGCAAGG------ACTCGCTGCCTCCGTCAGTGTAGCGCGCGTGCGG 593 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCG-TGGC 233 |||||||| ||||||||||||||||||||||||||||||| |||||| |||| Sbjct 594 CCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTC--GCTTCCGCTGGC 645 >seq96 Length=729 Score = 163 bits (180), Expect = 4e-38 Identities = 157/196 (80%), Gaps = 14/196 (7%) Strand=Plus/Minus Query 39 ACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCAT 98 |||||||||||||||||||| ||||||||||| | | |||||| | ||||||||| Sbjct 729 ACTCGCGCTTACTAGGAATT-CCTCGTTGAAGCGCCTC--TTGCAAAGCGCTATCCCCAG 673 Query 99 CACGATGAAATTTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATA 158 ||||| | | | | |||||| ||||| | | || | ||||| ||||| || | Sbjct 672 CACGACGGAGTCT--AAGATTCCCCGGCCATCTCTGGCAAGG------ACTCGCTGCCTC 621 Query 159 CATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 218 | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 620 CGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCC 561 Query 219 TCAAACTTCCG-TGGC 233 || |||||| |||| Sbjct 560 TC--GCTTCCGCTGGC 547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751998710555