Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900007755.1_202016-02-08] 177 sequences; 9,361,826 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq39 223 6e-56 seq118 172 1e-40 seq96 154 3e-35 >seq39 Length=817 Score = 223 bits (246), Expect = 6e-56 Identities = 199/244 (82%), Gaps = 13/244 (5%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAA 134 ||||||||| |||||||||||||||| |||| || ||||| |||||||||||| Sbjct 490 TTACTTTGAGGAAATTAGAGTGTTCAAGGCAGTAGTT-----GAATATATTAGCATGGAA 436 Query 135 TAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAAT 194 ||| |||| |||| | ||||||| |||||||||| || |||| ||||||||||| Sbjct 435 TAACAGAAGAGGA--TACGGTTCT--TTTGTTGGTTCG--GGGCCGC-GTAATGATTAAC 383 Query 195 AGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAA 254 ||||| |||||||| ||||||||| |||||||||||||||||||||| || Sbjct 382 AGGGACGGTCGGGGGCGTCAGTATTGGGGCGTCAGAGGTGAAATTCTTGGATCGCCCCAA 323 Query 255 GACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTA 314 ||||||||||||||||||| ||| ||||||| |||||||||||||| |||||||||||| Sbjct 322 GACTAACTACTGCGAAAGCATTCGCCAAGGACGTTTTCATTAATCA-AGAACGAAAGTTA 264 Query 315 GGGG 318 |||| Sbjct 263 GGGG 260 >seq118 Length=227 Score = 172 bits (190), Expect = 1e-40 Identities = 168/211 (80%), Gaps = 13/211 (6%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAA 134 ||||||||| |||||||||||||||| |||| || ||||| |||||||||||| Sbjct 28 TTACTTTGAGGAAATTAGAGTGTTCAAGGCAGTAGTT-----GAATATATTAGCATGGAA 82 Query 135 TAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAAT 194 ||| |||| |||| | ||||||| |||||||||| || |||| ||||||||||| Sbjct 83 TAACAGAAGAGGA--TACGGTTCT--TTTGTTGGTTCG--GGGCCGC-GTAATGATTAAC 135 Query 195 AGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAA 254 ||||| |||||||| ||||||||| |||||||||||||||||||||| || Sbjct 136 AGGGACGGTCGGGGGCGTCAGTATTGGGGCGTCAGAGGTGAAATTCTTGGATCGCCCCAA 195 Query 255 GACTAACTACTGCGAAAGCGTTCACCAAGGA 285 ||||||||||||||||||| ||| |||||| Sbjct 196 GACTAACTACTGCGAAAGCATTC-GCAAGGA 225 >seq96 Length=729 Score = 154 bits (170), Expect = 3e-35 Identities = 117/137 (85%), Gaps = 1/137 (1%) Strand=Plus/Plus Query 182 CGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCT 241 |||||||||||| ||||| |||||||| ||||||||| ||||||||||||||||| Sbjct 12 CGTAATGATTAACAGGGACGGTCGGGGGCGTCAGTATTGGGGCGTCAGAGGTGAAATTCT 71 Query 242 TGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAG 301 ||||| ||||||||||||||||||||| ||| ||||||| |||||||||||||| Sbjct 72 TGGATCGCCCCAAGACTAACTACTGCGAAAGCATTCGCCAAGGACGTTTTCATTAATCA- 130 Query 302 TGAACGAAAGTTAGGGG 318 |||||||||||||||| Sbjct 131 AGAACGAAAGTTAGGGG 147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915198380096