Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900007755.1_202016-02-08]
177 sequences; 9,361,826 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq96 253 3e-65
seq38 214 3e-53
>seq96
Length=729
Score = 253 bits (280), Expect = 3e-65
Identities = 214/257 (83%), Gaps = 7/257 (3%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 632 ACTCGCTGCCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 573
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||| ||||| ||||| | |||| | |||| ||||||||| | ||
Sbjct 572 CCTGTTATTGCCTCG--CTTCCGCTGGCTTGC-GCCAGTTGTCCTTCTAAGAAG--ATCC 518
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
||| | || | | ||| ||| || ||||||||||||||||||| ||||||
Sbjct 517 CCCAGCAATGCCAGGTAAC-CTAGTTAAAAGCC-AAGGTCTCGTTCGTTATCGCAATTAA 460
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 459 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAA 400
Query 242 AGAGCTATCAATCTGTC 258
|| ||| ||| |||||
Sbjct 399 AGTGCTCTCATCCTGTC 383
>seq38
Length=772
Score = 214 bits (236), Expect = 3e-53
Identities = 183/220 (83%), Gaps = 7/220 (3%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| || ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 560 ACTCGCTGCCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 619
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||| ||||| ||||| | |||| | |||| ||||||||| | ||
Sbjct 620 CCTGTTATTGCCTC--GCTTCCGCTGGCTTG-CGCCAGTTGTCCTTCTAAGAAG--ATCC 674
Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181
||| | || | | ||| ||| | | ||||||||||||||||||| ||||||
Sbjct 675 CCCAGCAAT-GCCAGGTAACCTAGTTA-AAAGCCAAGGTCTCGTTCGTTATCGCAATTAA 732
Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACC 221
|||||||||||||||||||||||||||||||||||||||
Sbjct 733 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACC 772
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796798633737
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |