Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900007755.1_202016-02-08] 177 sequences; 9,361,826 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq96 253 3e-65 seq38 214 3e-53 >seq96 Length=729 Score = 253 bits (280), Expect = 3e-65 Identities = 214/257 (83%), Gaps = 7/257 (3%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 632 ACTCGCTGCCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 573 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||| ||||| ||||| | |||| | |||| ||||||||| | || Sbjct 572 CCTGTTATTGCCTCG--CTTCCGCTGGCTTGC-GCCAGTTGTCCTTCTAAGAAG--ATCC 518 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 ||| | || | | ||| ||| || ||||||||||||||||||| |||||| Sbjct 517 CCCAGCAATGCCAGGTAAC-CTAGTTAAAAGCC-AAGGTCTCGTTCGTTATCGCAATTAA 460 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAA 241 ||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 459 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCACAAAATCAAGAA 400 Query 242 AGAGCTATCAATCTGTC 258 || ||| ||| ||||| Sbjct 399 AGTGCTCTCATCCTGTC 383 >seq38 Length=772 Score = 214 bits (236), Expect = 3e-53 Identities = 183/220 (83%), Gaps = 7/220 (3%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 560 ACTCGCTGCCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGA 619 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121 |||||||||||||| ||||| ||||| | |||| | |||| ||||||||| | || Sbjct 620 CCTGTTATTGCCTC--GCTTCCGCTGGCTTG-CGCCAGTTGTCCTTCTAAGAAG--ATCC 674 Query 122 ACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAA 181 ||| | || | | ||| ||| | | ||||||||||||||||||| |||||| Sbjct 675 CCCAGCAAT-GCCAGGTAACCTAGTTA-AAAGCCAAGGTCTCGTTCGTTATCGCAATTAA 732 Query 182 CCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACC 221 ||||||||||||||||||||||||||||||||||||||| Sbjct 733 GCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACC 772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796798633737