Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900007755.1_202016-02-08] 177 sequences; 9,361,826 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq98 430 2e-118 seq34 428 8e-118 seq102 217 3e-54 seq103 147 4e-33 seq147 136 7e-30 seq35 127 3e-27 >seq98 Length=482 Score = 430 bits (476), Expect = 2e-118 Identities = 274/297 (92%), Gaps = 7/297 (2%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTAC--CATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCT 58 ||||||| |||||| | |||||| |||||||||||||||||||||||||||| Sbjct 432 TACTAAGTTCAATTACTGCCGTGGGGC-----TCATCAGTAGGGTAAAACTAACCTGTCT 378 Query 59 CATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACC 118 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 377 CACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACC 318 Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct 317 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGAATCAAAAAGCAATGTCGCT 258 Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 257 ATGAACGCTTGACTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 198 Query 239 CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||| | ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 197 CTCAGGGTCTGAGGGTGTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCAC 141 >seq34 Length=406 Score = 428 bits (474), Expect = 8e-118 Identities = 273/296 (92%), Gaps = 7/296 (2%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTAC--CATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCT 58 ||||||| |||||| | |||||| |||||||||||||||||||||||||||| Sbjct 116 TACTAAGTTCAATTACTGCCGTGGGGC-----TCATCAGTAGGGTAAAACTAACCTGTCT 170 Query 59 CATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACC 118 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 171 CACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACC 230 Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct 231 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGAATCAAAAAGCAATGTCGCT 290 Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 238 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 291 ATGAACGCTTGACTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGC 350 Query 239 CTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 294 |||| | ||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 351 CTCAGGGTCTGAGGGTGTAAAGGATCGATAGGCCACACTTTCATGGTTTGTATTCA 406 >seq102 Length=392 Score = 217 bits (240), Expect = 3e-54 Identities = 135/145 (93%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 |||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct 392 CATCGAAGAATCAAAAAGCAATGTCGCTATGAACGCTTGACTGCCACAAGCCAGTTATCC 333 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 |||||||||||||||||||||||||||||||| | ||||| ||||||||||||||| Sbjct 332 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAGGGTCTGAGGGTGTAAAGGATCGATAGG 273 Query 271 CCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||| Sbjct 272 CCACACTTTCATGGTTTGTATTCAC 248 >seq103 Length=382 Score = 147 bits (162), Expect = 4e-33 Identities = 102/115 (89%), Gaps = 7/115 (6%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTAC--CATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCT 58 ||||||| |||||| | |||||| |||||||||||||||||||||||||||| Sbjct 110 TACTAAGTTCAATTACTGCCGTGGGGC-----TCATCAGTAGGGTAAAACTAACCTGTCT 56 Query 59 CATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGC 113 || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 55 CACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGC 1 >seq147 Length=151 Score = 136 bits (150), Expect = 7e-30 Identities = 86/93 (92%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 203 AGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGA 262 |||||||||||||||||||||||||||||||||||||||| | ||||| ||||||| Sbjct 151 AGTTATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAGGGTCTGAGGGTGTAAAGGA 92 Query 263 TCGATAGGCCACACTTTCATGGTTTGTATTCAC 295 ||||||||||||||||||||||||||||||||| Sbjct 91 TCGATAGGCCACACTTTCATGGTTTGTATTCAC 59 >seq35 Length=858 Score = 127 bits (140), Expect = 3e-27 Identities = 82/90 (91%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 206 TATCCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCG 265 ||||| ||||||||||||||||||||||||||||||| | ||||| |||||||||| Sbjct 1 TATCCTTGTGGTAACTTTTCTGGCACCTCTAGCCTCAGGGTCTGAGGGTGTAAAGGATCG 60 Query 266 ATAGGCCACACTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||||||||||||| Sbjct 61 ATAGGCCACACTTTCATGGTTTGTATTCAC 90 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854398487712