Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900007755.1_202016-02-08]
177 sequences; 9,361,826 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq38 250 5e-64
seq96 194 3e-47
>seq38
Length=772
Score = 250 bits (276), Expect = 5e-64
Identities = 211/257 (82%), Gaps = 13/257 (5%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131
||||||||| |||| | ||| |||||| ||||| |||||||||||||||||||||
Sbjct 670 CTTCTTAGAAGGACAACTGGCGCAAGCCAGCGGAAGC--GAGGCAATAACAGGTCTGTGA 613
Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191
|||||||||| ||||||||||||||||||||||||||||| ||| || ||||| |
Sbjct 612 TGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGGCAGCGAGT------C 559
Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251
|||| | | | | | ||| |||| ||| |||| |||||||||||||||| || ||||
Sbjct 558 CTTGCCAGAGATGGCCGGGGAATC---TTAGACTCCGTCGTGCTGGGGATAGCGCTTTGC 502
Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTA 311
|| || |||||||||||||| ||||||||||||| ||||||||| |||| ||||||
Sbjct 501 AA--GAGGCGCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGCTGATTA 444
Query 312 CGTCCCTGCCCTTTGTA 328
|||||||||||||||||
Sbjct 443 CGTCCCTGCCCTTTGTA 427
>seq96
Length=729
Score = 194 bits (214), Expect = 3e-47
Identities = 177/221 (80%), Gaps = 13/221 (6%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGA 131
||||||||| |||| | ||| |||||| ||||| |||||||||||||||||||||
Sbjct 522 CTTCTTAGAAGGACAACTGGCGCAAGCCAGCGGAAGC--GAGGCAATAACAGGTCTGTGA 579
Query 132 TGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCAC 191
|||||||||| ||||||||||||||||||||||||||||| ||| || ||||| |
Sbjct 580 TGCCCTTAGACGTTCTGGGCCGCACGCGCGCTACACTGACGGAGGCAGCGAGT------C 633
Query 192 CTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGC 251
|||| | | | | | ||| |||| ||| |||| |||||||||||||||| || ||||
Sbjct 634 CTTGCCAGAGATGGCCGGGGAATC---TTAGACTCCGTCGTGCTGGGGATAGCGCTTTGC 690
Query 252 AATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGT 292
|| || |||||||||||||| ||||||||||||| ||
Sbjct 691 AA--GAGGCGCTTCAACGAGGAATTCCTAGTAAGCGCGAGT 729
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947198323456
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |