Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900007755.1_202016-02-08]
177 sequences; 9,361,826 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq39 313 8e-83
seq40 257 5e-66
>seq39
Length=817
Score = 313 bits (346), Expect = 8e-83
Identities = 195/207 (94%), Gaps = 3/207 (1%)
Strand=Plus/Plus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||
Sbjct 614 GTACTCATTCCAATTACAAGACC--AAAG-GCCCTGTATCGTTATTTATTGTCACTACCT 670
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 671 CCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTC 730
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||
Sbjct 731 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTAGAAACCATGGTA 790
Query 181 GGCCACTATCCTACCATCGAAAGTTGA 207
|||| ||||||||||||||||||||||
Sbjct 791 GGCCTCTATCCTACCATCGAAAGTTGA 817
>seq40
Length=898
Score = 257 bits (284), Expect = 5e-66
Identities = 234/295 (79%), Gaps = 45/295 (15%)
Strand=Plus/Plus
Query 210 GGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTAT 269
|||||||||||||||||||||||| || | |||||| ||||||||||
Sbjct 1 GGGCAGAAATTTGAATGAACCATC-----CTAA---------GATTCGAAAAGTTATTAT 46
Query 270 GAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGA 329
|||||||||| |||||| ||||||||||||||||| ||| ||
Sbjct 47 GAATCACCAAAA-----CGAAGG---------TTTTATCTAATAAATACGCCC-----GA 87
Query 330 AGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGT 389
| | | | || |||||||||||||||||||||||||||||| ||||| ||
Sbjct 88 GGGCTG-------ATCAAGTATTAGCTCTAGAATTACCACGGTTATCCTTGTAGCAAC-- 138
Query 390 ACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGC 449
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 139 ACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACCGTATAA--TGC 196
Query 450 TTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 197 T-ATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 250
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510397326592
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |