Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900007755.1_202016-02-08] 177 sequences; 9,361,826 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq39 313 8e-83 seq40 257 5e-66 >seq39 Length=817 Score = 313 bits (346), Expect = 8e-83 Identities = 195/207 (94%), Gaps = 3/207 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||| Sbjct 614 GTACTCATTCCAATTACAAGACC--AAAG-GCCCTGTATCGTTATTTATTGTCACTACCT 670 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 671 CCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTC 730 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||| Sbjct 731 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTAGAAACCATGGTA 790 Query 181 GGCCACTATCCTACCATCGAAAGTTGA 207 |||| |||||||||||||||||||||| Sbjct 791 GGCCTCTATCCTACCATCGAAAGTTGA 817 >seq40 Length=898 Score = 257 bits (284), Expect = 5e-66 Identities = 234/295 (79%), Gaps = 45/295 (15%) Strand=Plus/Plus Query 210 GGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTAT 269 |||||||||||||||||||||||| || | |||||| |||||||||| Sbjct 1 GGGCAGAAATTTGAATGAACCATC-----CTAA---------GATTCGAAAAGTTATTAT 46 Query 270 GAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGA 329 |||||||||| |||||| ||||||||||||||||| ||| || Sbjct 47 GAATCACCAAAA-----CGAAGG---------TTTTATCTAATAAATACGCCC-----GA 87 Query 330 AGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGT 389 | | | | || |||||||||||||||||||||||||||||| ||||| || Sbjct 88 GGGCTG-------ATCAAGTATTAGCTCTAGAATTACCACGGTTATCCTTGTAGCAAC-- 138 Query 390 ACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGC 449 |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| Sbjct 139 ACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACCGTATAA--TGC 196 Query 450 TTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 197 T-ATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510397326592