Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900009515.1_202016-02-08] 227 sequences; 9,374,785 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq94 125 4e-27 seq179 98.7 6e-19 >seq94 Length=1062 Score = 125 bits (138), Expect = 4e-27 Identities = 97/117 (83%), Gaps = 10/117 (9%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||||||||||||||||||||| | || | || ||| Sbjct 922 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGGGGAAGGC----------TATTCCCC 971 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||| Sbjct 972 GATCCCTAGTCGGCATCGTTTATGGTTAAGACTACGACGGTATCTGATCATCTTCGA 1028 >seq179 Length=143 Score = 98.7 bits (108), Expect = 6e-19 Identities = 93/116 (80%), Gaps = 11/116 (9%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 || |||||||||||||||||||||||| |||||| | ||| | | || ||| Sbjct 140 GAGCCCAAAGACTTTGATTTCTCGTAATGTGCCG-GGGAG------GGCT---ATTCCCC 91 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCG 116 |||||| |||||||| ||||| ||||||||||||||| |||||||||| |||||| Sbjct 90 GATCCCGTGTCGGCATCGTTTATGGTTAAGACTACGAC-GTATCTGATCATCTTCG 36 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278399407530