Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900009515.1_202016-02-08]
227 sequences; 9,374,785 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq94 125 4e-27
seq179 98.7 6e-19
>seq94
Length=1062
Score = 125 bits (138), Expect = 4e-27
Identities = 97/117 (83%), Gaps = 10/117 (9%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||||||||||||||||||||| | || | || |||
Sbjct 922 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGGGGAAGGC----------TATTCCCC 971
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||
Sbjct 972 GATCCCTAGTCGGCATCGTTTATGGTTAAGACTACGACGGTATCTGATCATCTTCGA 1028
>seq179
Length=143
Score = 98.7 bits (108), Expect = 6e-19
Identities = 93/116 (80%), Gaps = 11/116 (9%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|| |||||||||||||||||||||||| |||||| | ||| | | || |||
Sbjct 140 GAGCCCAAAGACTTTGATTTCTCGTAATGTGCCG-GGGAG------GGCT---ATTCCCC 91
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCG 116
|||||| |||||||| ||||| ||||||||||||||| |||||||||| ||||||
Sbjct 90 GATCCCGTGTCGGCATCGTTTATGGTTAAGACTACGAC-GTATCTGATCATCTTCG 36
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278399407530
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |