Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900009515.1_202016-02-08]
227 sequences; 9,374,785 total letters
Query= NC_011356.1
Length=54896
Score E
Sequences producing significant alignments: (Bits) Value
seq95 646 0.0
>seq95
Length=1024
Score = 646 bits (716), Expect = 0.0
Identities = 393/416 (94%), Gaps = 0/416 (0%)
Strand=Plus/Plus
Query 4483 TTGCTTTTTCTGCCTTTTCACGCAGTGCCTGATAATTAATTTCGCTCACTTCGAACCTCT 4542
|||| | |||||| |||||||||||||||| | |||||||||||||||||||||||||
Sbjct 609 TTGCCTGCTCTGCCGCTTCACGCAGTGCCTGAGAGTTAATTTCGCTCACTTCGAACCTCT 668
Query 4543 CTGTTTACTGATAAGCTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAAC 4602
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 669 CTGTTTACTGATAAGTTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAAC 728
Query 4603 TGCCAGGCGTCTTCGTTCATCTATCGGATCGCCACACTCACAACAATGAGTTGCGGATAC 4662
||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 729 GACCAGGCGTCTTCGTTCATCTATCGGATCGCCACACTCACAACAATGAGTGGCAGATAT 788
Query 4663 AGTCTGGTAGTTCAGGCGACGCATTTTTATTGCTGTATTGCGCTGTAATTCTTCAATTTC 4722
|| ||||| ||||||||| ||||||||||||||||| ||||||||||||||||| |||||
Sbjct 789 AGCCTGGTGGTTCAGGCGGCGCATTTTTATTGCTGTGTTGCGCTGTAATTCTTCTATTTC 848
Query 4723 TGATGCTGAATCAATGATGTCTGCCATCTTTCATTAATCCCTGAATTGTTGGTTAATACG 4782
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 849 TGATGCTGAATCAATGATGTCTGCCATCTTTCATTAATCCCTGAACTGTTGGTTAATACG 908
Query 4783 CTTGAGGGTGAATGCGAACAATAAAAAAGGAGCCTGTAGCTCCCTGATGATTTTGCTTTT 4842
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 909 CTTGAGGGTGAATGCGAATAATAAAAAAGGAGCCTGTAGCTCCCTGATGATTTTGCTTTT 968
Query 4843 CATGTTCATCGCTCCTTAAAGACGCCGTTTAACATGCCGATCGCCAGACTTAAATG 4898
||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 969 CATGTTCATCGTTCCTTAAAGACGCCGTTTAACATGCCGATTGCCAGGCTTAAATG 1024
Score = 260 bits (288), Expect = 5e-65
Identities = 176/197 (89%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 4096 TTTCCAGTTCTGCTATGCGCTTACTTCCATCCGCGATTACTCCCTCGTAATATTCACGCT 4155
||||||||| || || |||||||| ||||||| ||| || || |||||||| |||||||
Sbjct 354 TTTCCAGTTTAGCAATACGCTTACTCCCATCCGAGATAACACCTTCGTAATACTCACGCT 413
Query 4156 GCTCGTTGAGTTTTGATTTTGCTGCTTCAAGCTCAACACGCAGCTTCCCAACCGTAAGCG 4215
|||||||||||||||||||||||| |||||||||||||||||| ||||| || || ||||
Sbjct 414 GCTCGTTGAGTTTTGATTTTGCTGTTTCAAGCTCAACACGCAGTTTCCCTACTGTTAGCG 473
Query 4216 CAATCCCCTCGTTCTCCTGGTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCAT 4275
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 474 CAATATCCTCGTTCTCCTGGTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCAT 533
Query 4276 CCAGAAGCGCCAGCGCA 4292
|||| || ||||| ||
Sbjct 534 CCAGCAGTTCCAGCACA 550
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 175545126794892
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |