Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900009525.1_202016-02-08] 172 sequences; 9,356,930 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq99 221 3e-55 seq100 174 4e-41 seq135 138 3e-30 seq143 132 1e-28 seq144 127 5e-27 >seq99 Length=297 Score = 221 bits (244), Expect = 3e-55 Identities = 217/276 (79%), Gaps = 3/276 (1%) Strand=Plus/Plus Query 80 ACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAA 139 ||||||||||||||| ||| |||||| | | || ||| |||||| ||| ||||| || Sbjct 1 ACTGGGCGTAAAGCGCGCGTAGGCGGATCGTTTAGTTAGGCGTGAAAGCCCTGGGCTCAA 60 Query 140 CCTGGGAATTGCATTTGTGACTG-CACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCA 198 || |||| ||| ||| |||| | ||||||||| | ||||| || |||||||| Sbjct 61 CCCAGGAACTGCGCTTGAAACTGGCTAGACTAGAGTCCGGGAGAGGAGGC-GGAATTCCC 119 Query 199 CGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTG 258 |||||| ||||||| ||||||||| ||| |||||||| |||||||||| ||| | || Sbjct 120 AGTGTAGAGGTGAAATTCGTAGATATTGGGAAGAACACCAGTGGCGAAGGCGGCCTC-TG 178 Query 259 GGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGT 318 | ||||||||| | | |||||||||||||||||||||||||||||||||||||| Sbjct 179 GACCGGTACTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGT 238 Query 319 AGTCCACGCCCTAAACGATATCAACTAGTTGTTGGG 354 |||||||||| |||||||| | |||| |||||| Sbjct 239 AGTCCACGCCGTAAACGATGTGTGCTAGCCGTTGGG 274 >seq100 Length=299 Score = 174 bits (192), Expect = 4e-41 Identities = 198/260 (76%), Gaps = 8/260 (3%) Strand=Plus/Plus Query 82 TGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAACC 141 |||| ||||||||| || |||||||| | ||| | |||||||| | |||||||| Sbjct 3 TGGGTGTAAAGCGTACGTAGGCGGTTCGGGAAGTTCGTCGTGAAATCTCTCGGCTTAAC- 61 Query 142 TGGGAATTGCATTTGTGACTGCAC---GACTAGAGT-GTGTCAGAGGGGGGTGGAATTCC 197 || || | | | || | | | |||| ||| | || ||||| | |||||||| Sbjct 62 TGAGAGGGG--TCGGCGAATACTCCCGGACTTGAGGAGCGT-AGAGGTAAGCGGAATTCC 118 Query 198 ACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCT 257 ||||||| ||||||||||||||||| |||||||||||| |||||||||| || || Sbjct 119 CGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACACCAGTGGCGAAGGCGGCTTACT 178 Query 258 GGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGG 317 ||| |||||||| | | |||||||||||||||||||| ||||||||||||| || Sbjct 179 GGGCGCTACCTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAACCGGATTAGATACCCGGG 238 Query 318 TAGTCCACGCCCTAAACGAT 337 ||||||||||| |||||||| Sbjct 239 TAGTCCACGCCGTAAACGAT 258 >seq135 Length=152 Score = 138 bits (152), Expect = 3e-30 Identities = 96/109 (88%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 229 AGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCG 288 |||||||||| |||||||||| | |||||| || ||||||||| | | |||||||| Sbjct 4 AGGAACACCAGTGGCGAAGGCGACTTCCTGGGCCAATACTGACGCTGAGGTGCGAAAGCG 63 Query 289 TGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 64 TGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGAT 112 >seq143 Length=146 Score = 132 bits (146), Expect = 1e-28 Identities = 115/143 (80%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 82 TGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAACC 141 |||| |||||||| ||| |||||||| || || | | ||||||| ||| |||| |||| Sbjct 3 TGGGTGTAAAGCGCGCGTAGGCGGTTTGGTCAGTCGGATGTGAAAGCCCTAGGCTCAACC 62 Query 142 TGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGT 201 ||||||| ||||| | ||||| ||||||||| || |||||| |||||||| | || Sbjct 63 TGGGAATGGCATTCGATACTGCCTGACTAGAGTATGGTAGAGGGAAGTGGAATTTCCGGT 122 Query 202 GTAGCAGTGAAATGCGTAGATAT 224 ||||| ||||||||||||||||| Sbjct 123 GTAGCGGTGAAATGCGTAGATAT 145 >seq144 Length=146 Score = 127 bits (140), Expect = 5e-27 Identities = 114/143 (80%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 82 TGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAACC 141 ||||| ||||||| ||| |||||||| |||| | ||||||| ||||||||| |||| Sbjct 3 TGGGCATAAAGCGCGCGTAGGCGGTTTGTTAAGTGGGATGTGAAAGCCCCGGGCTCAACC 62 Query 142 TGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGT 201 ||||||||||||| |||| |||||||| || ||||| ||| ||||||| || Sbjct 63 TGGGAATTGCATTCCAAACTGGCAAACTAGAGTATGGTAGAGGAAGGTAGAATTCCCTGT 122 Query 202 GTAGCAGTGAAATGCGTAGATAT 224 ||||| ||||||||||||||||| Sbjct 123 GTAGCGGTGAAATGCGTAGATAT 145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289597781888