Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900009525.1_202016-02-08] 172 sequences; 9,356,930 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq123 163 9e-38 seq118 163 9e-38 seq130 152 2e-34 >seq123 Length=186 Score = 163 bits (180), Expect = 9e-38 Identities = 113/128 (88%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||||| | ||||||||| |||||||||||| ||||||||||||||||||||| Sbjct 154 TACGGCCGCAAGGCTAAAACTCAAATGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 95 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 || ||||||||||| |||||||||||||||||||| | ||||||||||||| || | Sbjct 94 GTTGTTTAATTCGATGCAACGCGAAGAACCTTACCTACTCTTGACATCCTCAGAACTTGG 35 Query 121 TAGAGATA 128 |||||||| Sbjct 34 TAGAGATA 27 >seq118 Length=210 Score = 163 bits (180), Expect = 9e-38 Identities = 115/130 (88%), Gaps = 1/130 (1%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 154 TACGGTCGCAAGGTA-AAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 96 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 |||||||||||||| ||||||||||||||||||||| |||||||||||| || | | Sbjct 95 GTGGTTTAATTCGATGCAACGCGAAGAACCTTACCAGGCCTTGACATCCTCGGAACTTTG 36 Query 121 TAGAGATAGA 130 |||||| || Sbjct 35 CAGAGATGGA 26 >seq130 Length=170 Score = 152 bits (168), Expect = 2e-34 Identities = 98/107 (92%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| || |||||||||||||||||||||| ||||||||||||||||||||| Sbjct 158 TACGGTCGCAAGATTAAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGTGGAGCAT 99 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACAT 107 ||||||||||||||||||||||| |||||||||||| |||||||| Sbjct 98 GTGGTTTAATTCGAAGCAACGCGCAGAACCTTACCAGCCCTTGACAT 52 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503997413120