Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900009525.1_202016-02-08] 172 sequences; 9,356,930 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq99 165 1e-38 seq100 147 4e-33 seq143 95.1 2e-17 seq144 84.2 4e-14 seq135 75.2 2e-11 >seq99 Length=297 Score = 165 bits (182), Expect = 1e-38 Identities = 166/212 (78%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||| ||||||||||||| | |||||| | ||||||||||||||||||| Sbjct 212 CCCACGCTTTCGCACCTCAGCGTCAGTACCGGTCCAG-AGGCCGCCTTCGCCACTGGTGT 154 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 || ||| ||||||||| |||||||| |||||| ||||||||| | ||||||| | || Sbjct 153 TCTTCCCAATATCTACGAATTTCACCTCTACACTGGGAATTCCGCCT-CCTCTCCCGGAC 95 Query 121 TCAAG-AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGAC 179 || || | ||||||||| |||| ||||||||||||| | |||||| || || Sbjct 94 TCTAGTCTAGCCAGTTTCAAGCGCAGTTCCTGGGTTGAGCCCAGGGCTTTCACGCCTAAC 35 Query 180 TTGCCTTCCCGCCTACACGCCCTTTACACCCA 211 | | |||||||| ||| |||||| |||| Sbjct 34 TAAACGATCCGCCTACGCGCGCTTTACGCCCA 3 >seq100 Length=299 Score = 147 bits (162), Expect = 4e-33 Identities = 164/217 (76%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||| |||||||||||| || | |||| || ||||||||||||||||||| Sbjct 213 CCCACGCTTTCGCACCTCAGCGTCAGGTAGCGCCCAGTAAGCCGCCTTCGCCACTGGTGT 154 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||||| ||||||||||||||||||||||||| ||||||||| || ||||| | | Sbjct 153 TCCTCCCGATATCTACGCATTTCACCGCTACACCGGGAATTCCGCTTACCTCTACGCTCC 94 Query 121 TCAAGAAAAACAGT-TTCAAATGCAG---GCTATGGGTTGAGCCCATAGTTTTCACATCT 176 ||||| ||| ||| || | || | ||| |||| | || |||||| | Sbjct 93 TCAAGTCCGGGAGTATTC----GCCGACCCCTCTCAGTTAAGCCGAGAGATTTCACGACG 38 Query 177 GACTTGCCTTCCCGCCTACACGCCCTTTACACCCAAT 213 |||| || |||||||| | ||||||||||||| Sbjct 37 AACTTCCCGAACCGCCTACGTACGCTTTACACCCAAT 1 >seq143 Length=146 Score = 95.1 bits (104), Expect = 2e-17 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 69 ATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAGAAA 128 ||||||||||||||||||||||||| | |||||| || ||||| | |||| || | Sbjct 145 ATATCTACGCATTTCACCGCTACACCGGAAATTCCACTTCCCTCTACCATACTCTAGTCA 86 Query 129 AACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCC 188 |||| || ||||| ||||||||| | | ||||||||| |||| || | Sbjct 85 GGCAGTATCGAATGCCATTCCCAGGTTGAGCCTAGGGCTTTCACATCCGACTGACCAAAC 26 Query 189 CGCCTACACGCCCTTTACACCCAAT 213 ||||||| ||| ||||||||||||| Sbjct 25 CGCCTACGCGCGCTTTACACCCAAT 1 >seq144 Length=146 Score = 84.2 bits (92), Expect = 4e-14 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 68 TATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAGAA 127 ||||||||||||||||||||||||||| ||||||| | ||||| | |||| || Sbjct 146 TATATCTACGCATTTCACCGCTACACAGGGAATTCTACCTTCCTCTACCATACTCTAGTT 87 Query 128 AAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTC 187 |||||| |||||| |||||||||| | ||||||||| |||| | Sbjct 86 TGCCAGTTTGGAATGCAATTCCCAGGTTGAGCCCGGGGCTTTCACATCCCACTTAACAAA 27 Query 188 CCGCCTACACGCCCTTTACACCCAAT 213 |||||||| ||| ||||| |||||| Sbjct 26 CCGCCTACGCGCGCTTTATGCCCAAT 1 >seq135 Length=152 Score = 75.2 bits (82), Expect = 2e-11 Identities = 55/64 (86%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||| ||||||||||||| | |||| || |||||||||||||||||| Sbjct 67 CCCACGCTTTCGCACCTCAGCGTCAGTATTGGCCCAGGAAGTCGCCTTCGCCACTGGTGT 8 Query 61 TCCT 64 |||| Sbjct 7 TCCT 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828798619012