Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900009525.1_202016-02-08] 172 sequences; 9,356,930 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq99 275 2e-71 seq100 215 1e-53 seq135 165 2e-38 seq143 109 1e-21 seq144 105 2e-20 >seq99 Length=297 Score = 275 bits (304), Expect = 2e-71 Identities = 229/276 (83%), Gaps = 3/276 (1%) Strand=Plus/Plus Query 78 ACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAA 137 ||||||||||||| | ||||||| || | || ||| || ||||||| | ||||||| Sbjct 1 ACTGGGCGTAAAGCGCGCGTAGGCGGATCGTTTAGTTAGGCGTGAAAGCCCTGGGCTCAA 60 Query 138 CCCCGGGACTGCTTTTGAAACTG-CAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCT 196 ||| || ||||| ||||||||| | | ||||||| | |||| || | | |||||||| Sbjct 61 CCCAGGAACTGCGCTTGAAACTGGCTAGACTAGAGTCCGGGAGAGG-AGGCGGAATTCCC 119 Query 197 AGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTG 256 ||||||| |||||||| |||||||||| ||| |||||||||||||||||||||| | ||| Sbjct 120 AGTGTAGAGGTGAAATTCGTAGATATTGGGAAGAACACCAGTGGCGAAGGCGGCCT-CTG 178 Query 257 GACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGT 316 ||| | |||||| |||||| |||||||||||||||||||||||||||||||||||||| Sbjct 179 GACCGGTACTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGT 238 Query 317 AGTCCACGCCGTAAACGATGAATACTAGGTGTCGGG 352 |||||||||||||||||||| | |||| || ||| Sbjct 239 AGTCCACGCCGTAAACGATGTGTGCTAGCCGTTGGG 274 >seq100 Length=299 Score = 215 bits (238), Expect = 1e-53 Identities = 148/167 (89%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 178 AGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAG 237 || || ||| |||||||| ||||||||||||||||||||||||| ||||||||||||| Sbjct 101 AGAGGTAAGCGGAATTCCCGGTGTAGCGGTGAAATGCGTAGATATCGGGAGGAACACCAG 160 Query 238 TGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAA 297 ||||||||||||||| |||| | || ||||| |||||| ||||||||||||||||||| Sbjct 161 TGGCGAAGGCGGCTTACTGGGCGCTACCTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAA 220 Query 298 CAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAG 344 | ||||||||||||| ||||||||||||||||||||||| || |||| Sbjct 221 CCGGATTAGATACCCGGGTAGTCCACGCCGTAAACGATGGATGCTAG 267 >seq135 Length=152 Score = 165 bits (182), Expect = 2e-38 Identities = 113/126 (90%), Gaps = 1/126 (1%) Strand=Plus/Plus Query 227 AGGAACACCAGTGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCG 286 |||||||||||||||||||||| ||| |||| | |||||| |||||| |||||||| Sbjct 4 AGGAACACCAGTGGCGAAGGCGACTTCCTGGGCCAATACTGACGCTGAGGTGCGAAAGCG 63 Query 287 TGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGT 346 |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| | Sbjct 64 TGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATG-AGACTAGAT 122 Query 347 GTCGGG 352 |||||| Sbjct 123 GTCGGG 128 >seq143 Length=146 Score = 109 bits (120), Expect = 1e-21 Identities = 110/143 (77%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 80 TGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACC 139 |||| |||||| | ||||||| ||||| | |||| || ||||||| | ||||||||| Sbjct 3 TGGGTGTAAAGCGCGCGTAGGCGGTTTGGTCAGTCGGATGTGAAAGCCCTAGGCTCAACC 62 Query 140 CCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGT 199 || | || || || ||||| | ||||||| | || || |||||||||| | || Sbjct 63 TGGGAATGGCATTCGATACTGCCTGACTAGAGTATGGTAGAGGGAAGTGGAATTTCCGGT 122 Query 200 GTAGCGGTGAAATGCGTAGATAT 222 ||||||||||||||||||||||| Sbjct 123 GTAGCGGTGAAATGCGTAGATAT 145 >seq144 Length=146 Score = 105 bits (116), Expect = 2e-20 Identities = 109/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 80 TGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACC 139 ||||| ||||| | ||||||| ||||| |||||| || ||||||| | ||||||||| Sbjct 3 TGGGCATAAAGCGCGCGTAGGCGGTTTGTTAAGTGGGATGTGAAAGCCCCGGGCTCAACC 62 Query 140 CCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGT 199 || | ||| || |||||| ||||||| | || || | || ||||||| || Sbjct 63 TGGGAATTGCATTCCAAACTGGCAAACTAGAGTATGGTAGAGGAAGGTAGAATTCCCTGT 122 Query 200 GTAGCGGTGAAATGCGTAGATAT 222 ||||||||||||||||||||||| Sbjct 123 GTAGCGGTGAAATGCGTAGATAT 145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203197930496