Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900009525.1_202016-02-08]
172 sequences; 9,356,930 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq31 210 2e-49
seq27 187 2e-42
>seq31
Length=271146
Score = 210 bits (232), Expect = 2e-49
Identities = 728/1130 (64%), Gaps = 28/1130 (2%)
Strand=Plus/Plus
Query 65806 AAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGCAAATTGGAACG 65865
||||| || || | ||||||||| || | | | || || | || ||||| ||| || |
Sbjct 88551 AAAAGCATCAGCTAAACCTTGAACACCCACAGCTATAGGTCTATTACGCATATTCGATCT 88610
Query 65866 TCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAATTGCGTGTCAC 65925
|| || || || || ||||| |||| | |||||||| | ||||| || || || ||
Sbjct 88611 CCTAGCTTCTGGAACGGGGTAAAAATTTCTGTCGATAATTCTGTTCAAGTTACGAGTAAC 88670
Query 65926 CACATGCACGATACGTCGCAATTGTTCGAAATCAAAATGTTTAGGACGATCGG-GAGTGC 65984
||| | ||| ||| | ||| || | ||| || | | | ||||
Sbjct 88671 CACTTTGGTGATTTCATGCAGCTTTTCAAAGT-----TGT-----ACCAGCAGTGAGTAT 88720
Query 65985 C---GGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCTATCTCGT 66041
| || | ||||| ||||| |||| ||| || | ||| |||||||| |||| |
Sbjct 88721 CATCGGTTTCAACAAAGGCTGGAAGAGCAATAGAAGCCAAGTTACAGACAGCAGTCTCTT 88780
Query 66042 CAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAAT 66101
| || | | || || |||||||| ||| || ||| | | ||| ||||| |
Sbjct 88781 CCGGGGAAGAGTATTCAACAATTTCACAGCAAAGGTTAGAGGATTTAATGACACCCAAGT 88840
Query 66102 TCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCT 66161
||| || ||| | || || || |||||||| |||| |||| | ||||| || || |
Sbjct 88841 TCTTCTGGTTAGTTTTTTTGTTACAAGCATCCTTATACAGCATGAATGGAGTACCAGTTT 88900
Query 66162 CAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACCGTACGTACCGCCC 66221
| ||| | ||||| |||||||| |||||| | || || | || || | |
Sbjct 88901 CTGTTTGTGCCTCAAGGATGGCGTACCAAAGCTTTTGGGCTTTGATGGTTTGTCTTCCAC 88960
Query 66222 TACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACC-CCATA--CTTCGG 66278
||||| |||||| |||||| | | || || |||| | ||||| | ||||
Sbjct 88961 GACCTTCCTTTTCGTATCTTTCGTACAATTCCTCAAA---TTCATCTCCATAGACGTCGG 89017
Query 66279 ACAGACATGGA----CACTTGTGTGGACACATCAGCGACCAATCACCATCCTGTTCTACA 66334
|| | ||| |||||| || | | ||| | |||||| |||| |||||||||
Sbjct 89018 CAAGGCCAGGAGCTTCACTTG----GAGAGAACAGGGTCCAATCGCCATTCTGTTCTACT 89073
Query 66335 CGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCC 66394
| ||| || |||||||| ||||| | ||| ||| | || | |||| ||||
Sbjct 89074 CTTTTCATGAACAGATCAGGGATCCACAAAGCGGGGAATAAGTCTCTAGCTCTGATCTCC 89133
Query 66395 TCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCC 66454
|| | || || || || || | || | ||| |||||||||||||||||||||| |||
Sbjct 89134 TCTTTACCATGGTTCTTACGAATATCAATGAAGGCAAAGATGTCGGCATGCCATGGCTCC 89193
Query 66455 AGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCGACA 66514
| ||| | || || | || ||||||| ||||||||||| || || |||||
Sbjct 89194 AAGTACAAAGCAAATGCACCAGGACGTTTGTTACCACCTTGGTCAACATAACGAGCAGTG 89253
Query 66515 TTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCGATG 66574
||||||||||| | || ||| || | | || || || | || || || || | |||
Sbjct 89254 TTGTTGAAGACCCTCACCATTGGAATAATACCATTCGAAGTACCGTTAGTACCAGCAATG 89313
Query 66575 GGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTCGAG 66634
||||||| || || |||| |||| | || |||||| ||||| || || || |||
Sbjct 89314 TAGGATCCTGTGGCACGAATATTATGAATGTGCAAACCAATTCCACCAGCAGTTTTGGAG 89373
Query 66635 ATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCCTTGATGGTC 66694
|| |||||| || || || | | ||||| ||||| |||||| || ||||
Sbjct 89374 ATTAAAGCACATTCCTTCAAAGTATCGTAAATGCCTTCAATTGAGTCATCCCGCATGGCA 89433
Query 66695 AGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGGGTGGGTGTA 66754
| | | | ||||| | ||| || | || || | || || || || || |
Sbjct 89434 ACTAAGAAACATGATGACATTTGTGGGTGAGGGGTACCAGCGTTAAACAGAGTAGGAGAG 89493
Query 66755 GCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCATCAATGTTT 66814
|| || || || || | || ||| | || || || || || || ||||||
Sbjct 89494 GCATGAGTGAAATACTTCTGACTCATAAAGTTATAAGTTTCAATAACTCTTGCAATGTCA 89553
Query 66815 TCGCCATGAATCCCGAGTGCACATCGCATCAGGAGGTATTGAGGCCGTTCGACCAGCCGA 66874
|| |||||||| |||| ||| ||||| | | || |||||| ||||| | | |
Sbjct 89554 TCACCATGAATGCCGATAGCAACACGCATAATCAAGTGTTGAGGACGTTCTGCAACATTA 89613
Query 66875 TCCTTGATATGCATTAAGTAGGAGCGTTCCAGGGTCTTGATACCAAAGTA 66924
| || || || | ||| || | ||||| |||||||| ||||||||
Sbjct 89614 CCATTAATTCTCAGAAGGTAAGATCTTTCCAAGGTCTTGAATCCAAAGTA 89663
>seq27
Length=543458
Score = 187 bits (206), Expect = 2e-42
Identities = 591/900 (66%), Gaps = 22/900 (2%)
Strand=Plus/Minus
Query 61025 ATGAACCCCTATTGCAAGAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGG 61084
||||||| || || |||||| |||||||| || | ||||| | |||| | |
Sbjct 216676 ATGAACCACTCTTAGTTGAGAATAAACGTCGTTTTGTGCTCTTCCCTTTGAAGTACCACG 216617
Query 61085 ATATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATT 61144
|||| |||| |||||||| |||| ||||||||||| ||||| | ||||| | ||
Sbjct 216616 ATATCTGGCAAATGTACAAGCAGGCCGAAGCTTCCTTTTGGACTGCTGAGGAAATAGACC 216557
Query 61145 TGTCCAAAGACATGAATGACTGGGAGCGTT-TATCGAGCGGT---GAACAACATTTCAT- 61199
|| || || || |||||||| | | ||| || || | ||| || |||||
Sbjct 216556 TGGGTAAGGATTTGCATGACTGGAATAATCGTAT-GAACGATAATGAAAAATTCTTCATC 216498
Query 61200 TAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGA 61259
| | | || | || |||||||| || || |||||||| |||||||| || || ||||
Sbjct 216497 TCGAGA-GTCCTTGCCTTCTTTGCTGCCTCTGACGGTATTGTCAATGAAAACTTGGTGGA 216439
Query 61260 ACGTTTC-GCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTG 61318
| |||| | || | |||| ||| | | || || || || ||||| ||||||||
Sbjct 216438 AAATTTCAGTGCTG-AGGTTCAACTTCCCGAAGCAAAATGCTTTTACGGTTTCCAGATCA 216380
Query 61319 CCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGC 61378
|||||||| | ||||| |||| ||| | || || ||||| ||||||| || |
Sbjct 216379 TGATGGAGAACATTCACTCCGAGACTTACTCCTTGCTGATTGATACTTACATCAAAGATC 216320
Query 61379 GGGCGGAACGTGAACGATTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAG 61438
|| |||| ||||||||||||||||||| || || | || || |
Sbjct 216319 CAAAAGAGTCTGAATTCCTGTTCAATGCCATCGAGACCATTCCATGTATCAAAGAAAAGG 216260
Query 61439 CGGATTGGGCCTTCAATTGGATCACCAGT-ACAACGGCTACATTTGGTGAACGATTGCTG 61497
| || |||||| | | ||||| | | || | | | || | |||||| ||| |
Sbjct 216259 CTGACTGGGCCATGAGATGGATTTCTGATGACGATGCATTG-TTCGCTGAACGTTTGGTT 216201
Query 61498 GCATTTGCGGTGGTCGAGGGTGTATT--TTTCAGTGGATCGTTTGCCGCAATCTTTTGGT 61555
|| || || | || |||||| | || |||||| |||| ||||| | ||||| ||||
Sbjct 216200 GCCTTCGCTGCTGTTGAGGGTATCTTCTTTTCAG--GATCTTTTGCTTCTATCTTCTGGT 216143
Query 61556 TGAAGAAACGTGGACTTATGCCCGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACG 61615
||||||| | || || ||||| ||| |||||||| ||||||| | || | | ||||
Sbjct 216142 TGAAGAAGAGAGGTCTCATGCCAGGTTTGACCTTCTCCAATGAGCTTATTTGCAGAGACG 216083
Query 61616 AGGGCATGCATTGTGATTTTGCTGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGT 61675
|||| | || ||| |||||| |||||||| | || | ||| | |
Sbjct 216082 AGGGATTACACACTGACTTTGCTTGCTTGCTATTTTCTC---ATTTAAACAATAGAGCCA 216026
Query 61676 CGGAGGAGCGTGTGGGTGAGATTGTTCGTGAGGCGGTAACTATCG--AACAGGAATTTCT 61733
||||| || | ||||| | ||||| || |||| || ||| | |||
Sbjct 216025 GTGAGGAAATCGTTGAAAAGATTATCACAGAGGCTGTCGAGATCGAAAAAAGGTACTTC- 215967
Query 61734 GACTGACGCTTTGCCCGTCTCACTCATCGGCATGAATTGTGGACTAATGTCGCAGTATAT 61793
|| |||||| | || ||||| | | || ||||| || | | |||| |||||| |
Sbjct 215966 -ACAGACGCTCTTCCTGTCTCCTTACTGGGGATGAACTGCAGCTTGATGTGCCAGTATGT 215908
Query 61794 TGAATTTGTTGCCGACCGTCTGTTGGTCGATTTGGGTATGAAGCGGATCTATAATACGAA 61853
||| || ||||| ||| | || |||| | | |||| | || | | || || ||
Sbjct 215907 TGAGTTCGTTGCTGACAGACTACTGGTAGCTCTGGGCAACAAAAAGGTGTACAACGTCAA 215848
Query 61854 AAACCCATTTGATTTCATGGACATGATTTCGCTGGATGGCAAGACGAATTTTTTCGAGAA 61913
|| |||||||| |||||||| | ||||| ||| || || || || || ||||| ||
Sbjct 215847 CAATCCATTTGACTTCATGGAGAACATTTCTTTGGCCGGTAAAACCAACTTCTTCGAAAA 215788
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567166598080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |