Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900010155.1_202016-02-08] 143 sequences; 9,353,174 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq9 223 6e-56 >seq9 Length=3940 Score = 223 bits (246), Expect = 6e-56 Identities = 199/244 (82%), Gaps = 13/244 (5%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAA 134 ||||||||| |||||||||||||||| |||| || ||||| |||||||||||| Sbjct 1182 TTACTTTGAGGAAATTAGAGTGTTCAAGGCAGTAGTT-----GAATATATTAGCATGGAA 1236 Query 135 TAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAAT 194 ||| |||| |||| | ||||||| |||||||||| || |||| ||||||||||| Sbjct 1237 TAACAGAAGAGGA--TACGGTTCT--TTTGTTGGTTCG--GGGCCGC-GTAATGATTAAC 1289 Query 195 AGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAA 254 ||||| |||||||| ||||||||| |||||||||||||||||||||| || Sbjct 1290 AGGGACGGTCGGGGGCGTCAGTATTGGGGCGTCAGAGGTGAAATTCTTGGATCGCCCCAA 1349 Query 255 GACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTA 314 ||||||||||||||||||| ||| ||||||| |||||||||||||| |||||||||||| Sbjct 1350 GACTAACTACTGCGAAAGCATTCGCCAAGGACGTTTTCATTAATCA-AGAACGAAAGTTA 1408 Query 315 GGGG 318 |||| Sbjct 1409 GGGG 1412 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915198691264