Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900013415.1_202016-02-08] 223 sequences; 9,369,803 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq67 125 4e-27 seq66 125 4e-27 seq91 98.7 6e-19 >seq67 Length=693 Score = 125 bits (138), Expect = 4e-27 Identities = 97/117 (83%), Gaps = 10/117 (9%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||||||||||||||||||||| | || | || ||| Sbjct 142 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGGGGAAGGC----------TATTCCCC 191 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||| Sbjct 192 GATCCCTAGTCGGCATCGTTTATGGTTAAGACTACGACGGTATCTGATCATCTTCGA 248 >seq66 Length=1002 Score = 125 bits (138), Expect = 4e-27 Identities = 97/117 (83%), Gaps = 10/117 (9%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||||||||||||||||||||| | || | || ||| Sbjct 872 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGGGGAAGGC----------TATTCCCC 921 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||| Sbjct 922 GATCCCTAGTCGGCATCGTTTATGGTTAAGACTACGACGGTATCTGATCATCTTCGA 978 >seq91 Length=586 Score = 98.7 bits (108), Expect = 6e-19 Identities = 80/99 (81%), Gaps = 10/99 (10%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||||||||||||||||||||| | || | || ||| Sbjct 498 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGGGGAAGGC----------TATTCCCC 547 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACG 99 |||||||||||||||| ||||| |||||||||||||||| Sbjct 548 GATCCCTAGTCGGCATCGTTTATGGTTAAGACTACGACG 586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278399417970