Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900013415.1_202016-02-08] 223 sequences; 9,369,803 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq109 197 6e-48 seq172 196 2e-47 seq65 183 1e-43 seq100 141 4e-31 seq154 134 6e-29 seq103 98.7 4e-18 >seq109 Length=320 Score = 197 bits (218), Expect = 6e-48 Identities = 127/138 (92%), Gaps = 2/138 (1%) Strand=Plus/Minus Query 548 TGAGTAAG--AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTG 605 ||||| || |||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct 194 TGAGTGAGCCAGCACCCCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCG 135 Query 606 AAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAA 665 ||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||| | Sbjct 134 AAGCCTGAGGAAACTCTGGTGGAGGCCCGCAGCGGTTCTGACGTGCAAATCGATCGTCGA 75 Query 666 ATTTGGGTATAGGGGCGA 683 |||||||||||||||||| Sbjct 74 ATTTGGGTATAGGGGCGA 57 >seq172 Length=170 Score = 196 bits (216), Expect = 2e-47 Identities = 116/121 (96%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 563 CTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCT 622 ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| Sbjct 167 CTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCGAAGCCTGAGGAAACTCT 108 Query 623 GGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCG 682 ||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct 107 GGTGGAGGCCCGCAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGGCG 48 Query 683 A 683 | Sbjct 47 A 47 >seq65 Length=498 Score = 183 bits (202), Expect = 1e-43 Identities = 119/130 (92%), Gaps = 2/130 (2%) Strand=Plus/Minus Query 548 TGAGTAAG--AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTG 605 ||||| || |||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct 130 TGAGTGAGCCAGCACCCCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCG 71 Query 606 AAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAA 665 ||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||| | Sbjct 70 AAGCCTGAGGAAACTCTGGTGGAGGCCCGCAGCGGTTCTGACGTGCAAATCGATCGTCGA 11 Query 666 ATTTGGGTAT 675 |||||||||| Sbjct 10 ATTTGGGTAT 1 Score = 158 bits (174), Expect = 5e-36 Identities = 134/163 (82%), Gaps = 3/163 (2%) Strand=Plus/Minus Query 36 CGAC-GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 |||| ||||||||||||||||||||||||||||||| || |||| | | || || | Sbjct 412 CGACAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAA--GGTGGTAGGGTCCATCAAAGAC 355 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||| || ||||||||||||| ||||||| |||||| ||||||||||||| |||| Sbjct 354 TAAATATCAGCGAGAGACCGATAGCAAACAAGTACAGTGATGGAAAGATGAAAAGAACTT 295 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197 || ||||||||| ||| || |||||||||| | ||||||| Sbjct 294 TGAAAAGAGAGTGAAACAGTGCGTGAAATTGGGGGGAGGGAAG 252 >seq100 Length=402 Score = 141 bits (156), Expect = 4e-31 Identities = 116/139 (83%), Gaps = 3/139 (2%) Strand=Plus/Minus Query 36 CGAC-GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 |||| ||||||||||||||||||||||||||||||| || |||| | | || || | Sbjct 137 CGACAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAA--GGTGGTAGGGTCCATCAAAGAC 80 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||| || ||||||||||||| ||||||| |||||| ||||||||||||| |||| Sbjct 79 TAAATATCAGCGAGAGACCGATAGCAAACAAGTACAGTGATGGAAAGATGAAAAGAACTT 20 Query 155 TGGAAAGAGAGTTAAAAAG 173 || ||||||||| ||| || Sbjct 19 TGAAAAGAGAGTGAAACAG 1 >seq154 Length=199 Score = 134 bits (148), Expect = 6e-29 Identities = 109/130 (84%), Gaps = 3/130 (2%) Strand=Plus/Minus Query 36 CGAC-GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 |||| ||||||||||||||||||||||||||||||| || |||| | | || || | Sbjct 128 CGACAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAA--GGTGGTAGGGTCCATCAAAGAC 71 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||| || ||||||||||||| ||||||| |||||| ||||||||||||| |||| Sbjct 70 TAAATATCAGCGAGAGACCGATAGCAAACAAGTACAGTGATGGAAAGATGAAAAGAACTT 11 Query 155 TGGAAAGAGA 164 || ||||||| Sbjct 10 TGAAAAGAGA 1 >seq103 Length=368 Score = 98.7 bits (108), Expect = 4e-18 Identities = 86/105 (82%), Gaps = 3/105 (3%) Strand=Plus/Minus Query 36 CGAC-GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 |||| ||||||||||||||||||||||||||||||| || |||| | | || || | Sbjct 103 CGACAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAA--GGTGGTAGGGTCCATCAAAGAC 46 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAA 139 ||||||| || ||||||||||||| ||||||| |||||| ||| Sbjct 45 TAAATATCAGCGAGAGACCGATAGCAAACAAGTACAGTGATGGAA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079995216650