Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900013415.1_202016-02-08] 223 sequences; 9,369,803 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq115 282 1e-73 seq127 269 7e-70 seq128 203 8e-50 seq219 91.5 4e-16 >seq115 Length=297 Score = 282 bits (312), Expect = 1e-73 Identities = 227/273 (83%), Gaps = 1/273 (0%) Strand=Plus/Plus Query 82 TGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAACC 141 |||| |||||||| ||| |||||| | ||||| | | ||||||| ||| ||||| |||| Sbjct 3 TGGGTGTAAAGCGCGCGTAGGCGGATTAGTAAGTCGGATGTGAAAGCCCTGGGCTCAACC 62 Query 142 TGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGT 201 |||||| |||||| | ||||| ||||||||| || |||||| |||||||||| || Sbjct 63 TGGGAACTGCATTCGATACTGCTTGACTAGAGTATGGTAGAGGGAAGTGGAATTCCG-GT 121 Query 202 GTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGA 261 ||||| ||||||||||||||||| | |||||||||| |||||||||| | |||||| Sbjct 122 GTAGCGGTGAAATGCGTAGATATCGGAAGGAACACCAGTGGCGAAGGCGACTTCCTGGGC 181 Query 262 TAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGT 321 || ||||||||| | | ||||||||||||||||||||||||||||||||||||||||| Sbjct 182 CAATACTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGT 241 Query 322 CCACGCCCTAAACGATATCAACTAGTTGTTGGG 354 ||||||| |||||||| |||||| ||||||| Sbjct 242 CCACGCCGTAAACGATGAGAACTAGATGTTGGG 274 >seq127 Length=275 Score = 269 bits (298), Expect = 7e-70 Identities = 223/268 (83%), Gaps = 3/268 (1%) Strand=Plus/Plus Query 80 ACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAA 139 |||||||||||||||| || |||||||| | |||| || ||||||| ||| ||||| || Sbjct 1 ACTGGGCGTAAAGCGTTCGTAGGCGGTTAT-TAAGCAAGATGTGAAAGCCCAGGGCTCAA 59 Query 140 CCTGGGAATTGCATTTGTGACTGCACGACTAGAGTG-TGTCAGAGGGGGGTGGAATTCCA 198 ||| |||| ||||||| |||| ||||||||| ||| |||||| ||||||||| | Sbjct 60 CCTTGGAACTGCATTTTGAACTGGTAGACTAGAGTACTGT-AGAGGGTGGTGGAATTTCC 118 Query 199 CGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTG 258 ||||||| |||||||||||||| || | ||||||| || |||||||||| ||| |||| Sbjct 119 AGTGTAGCGGTGAAATGCGTAGAGATTGGAAGGAACATCAGTGGCGAAGGCGGCCACCTG 178 Query 259 GGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGT 318 | | ||||||||| | | ||||||||||||||||| ||||||||||||||||||||| Sbjct 179 GACAGATACTGACGCTGAGGAACGAAAGCGTGGGGAGCGAACAGGATTAGATACCCTGGT 238 Query 319 AGTCCACGCCCTAAACGATATCAACTAG 346 |||||||||| |||||||| |||||||| Sbjct 239 AGTCCACGCCGTAAACGATGTCAACTAG 266 >seq128 Length=260 Score = 203 bits (224), Expect = 8e-50 Identities = 175/217 (81%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 121 GTGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCA 180 |||||| ||| ||||| |||| |||| ||| |||| |||| ||||||| | | Sbjct 11 GTGAAAGCCCTGGGCTCAACCCAGGAACTGCCTTTGAAACTGGTGTGCTAGAGTCCGGGA 70 Query 181 GAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAAT 240 ||||| |||||||||| |||||| ||||||| ||||||||| ||| |||||||| | Sbjct 71 GAGGGTAGTGGAATTCCCAGTGTAGAGGTGAAATTCGTAGATATTGGGAAGAACACCAGT 130 Query 241 GGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAAC 300 ||||||||| || ||||| ||||||||| | || |||||||||||||||||||| Sbjct 131 GGCGAAGGCGGCTACCTGGACCGGTACTGACGCTGAGGCGCGAAAGCGTGGGGAGCAAAC 190 Query 301 AGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337 |||||||||||||||||||||||||||| |||||||| Sbjct 191 AGGATTAGATACCCTGGTAGTCCACGCCGTAAACGAT 227 >seq219 Length=107 Score = 91.5 bits (100), Expect = 4e-16 Identities = 86/107 (80%), Gaps = 2/107 (2%) Strand=Plus/Plus Query 80 ACTGGGCGTAAAGCGTGCGCAGGCGG-TTGTGTAAGACAGGTGTGAAATCCCCGGGCTTA 138 |||||| |||||||||||| |||||| |||| |||| || ||||||| ||||||||| | Sbjct 1 ACTGGGTGTAAAGCGTGCGTAGGCGGATTGT-TAAGTGAGATGTGAAAGCCCCGGGCTCA 59 Query 139 ACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGG 185 ||||||||| ||||||| |||| | ||||||| | |||||| Sbjct 60 ACCTGGGAACTGCATTTCAAACTGGCAGTCTAGAGTATTGTAGAGGG 106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289597124192