Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900013415.1_202016-02-08]
223 sequences; 9,369,803 total letters
Query= AAMG01000383.1
Length=435
Score E
Sequences producing significant alignments: (Bits) Value
seq115 282 1e-73
seq127 269 7e-70
seq128 203 8e-50
seq219 91.5 4e-16
>seq115
Length=297
Score = 282 bits (312), Expect = 1e-73
Identities = 227/273 (83%), Gaps = 1/273 (0%)
Strand=Plus/Plus
Query 82 TGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAACC 141
|||| |||||||| ||| |||||| | ||||| | | ||||||| ||| ||||| ||||
Sbjct 3 TGGGTGTAAAGCGCGCGTAGGCGGATTAGTAAGTCGGATGTGAAAGCCCTGGGCTCAACC 62
Query 142 TGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGT 201
|||||| |||||| | ||||| ||||||||| || |||||| |||||||||| ||
Sbjct 63 TGGGAACTGCATTCGATACTGCTTGACTAGAGTATGGTAGAGGGAAGTGGAATTCCG-GT 121
Query 202 GTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGA 261
||||| ||||||||||||||||| | |||||||||| |||||||||| | ||||||
Sbjct 122 GTAGCGGTGAAATGCGTAGATATCGGAAGGAACACCAGTGGCGAAGGCGACTTCCTGGGC 181
Query 262 TAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGT 321
|| ||||||||| | | |||||||||||||||||||||||||||||||||||||||||
Sbjct 182 CAATACTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGT 241
Query 322 CCACGCCCTAAACGATATCAACTAGTTGTTGGG 354
||||||| |||||||| |||||| |||||||
Sbjct 242 CCACGCCGTAAACGATGAGAACTAGATGTTGGG 274
>seq127
Length=275
Score = 269 bits (298), Expect = 7e-70
Identities = 223/268 (83%), Gaps = 3/268 (1%)
Strand=Plus/Plus
Query 80 ACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAA 139
|||||||||||||||| || |||||||| | |||| || ||||||| ||| ||||| ||
Sbjct 1 ACTGGGCGTAAAGCGTTCGTAGGCGGTTAT-TAAGCAAGATGTGAAAGCCCAGGGCTCAA 59
Query 140 CCTGGGAATTGCATTTGTGACTGCACGACTAGAGTG-TGTCAGAGGGGGGTGGAATTCCA 198
||| |||| ||||||| |||| ||||||||| ||| |||||| ||||||||| |
Sbjct 60 CCTTGGAACTGCATTTTGAACTGGTAGACTAGAGTACTGT-AGAGGGTGGTGGAATTTCC 118
Query 199 CGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTG 258
||||||| |||||||||||||| || | ||||||| || |||||||||| ||| ||||
Sbjct 119 AGTGTAGCGGTGAAATGCGTAGAGATTGGAAGGAACATCAGTGGCGAAGGCGGCCACCTG 178
Query 259 GGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGT 318
| | ||||||||| | | ||||||||||||||||| |||||||||||||||||||||
Sbjct 179 GACAGATACTGACGCTGAGGAACGAAAGCGTGGGGAGCGAACAGGATTAGATACCCTGGT 238
Query 319 AGTCCACGCCCTAAACGATATCAACTAG 346
|||||||||| |||||||| ||||||||
Sbjct 239 AGTCCACGCCGTAAACGATGTCAACTAG 266
>seq128
Length=260
Score = 203 bits (224), Expect = 8e-50
Identities = 175/217 (81%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 121 GTGAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCA 180
|||||| ||| ||||| |||| |||| ||| |||| |||| ||||||| | |
Sbjct 11 GTGAAAGCCCTGGGCTCAACCCAGGAACTGCCTTTGAAACTGGTGTGCTAGAGTCCGGGA 70
Query 181 GAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAAT 240
||||| |||||||||| |||||| ||||||| ||||||||| ||| |||||||| |
Sbjct 71 GAGGGTAGTGGAATTCCCAGTGTAGAGGTGAAATTCGTAGATATTGGGAAGAACACCAGT 130
Query 241 GGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAAC 300
||||||||| || ||||| ||||||||| | || ||||||||||||||||||||
Sbjct 131 GGCGAAGGCGGCTACCTGGACCGGTACTGACGCTGAGGCGCGAAAGCGTGGGGAGCAAAC 190
Query 301 AGGATTAGATACCCTGGTAGTCCACGCCCTAAACGAT 337
|||||||||||||||||||||||||||| ||||||||
Sbjct 191 AGGATTAGATACCCTGGTAGTCCACGCCGTAAACGAT 227
>seq219
Length=107
Score = 91.5 bits (100), Expect = 4e-16
Identities = 86/107 (80%), Gaps = 2/107 (2%)
Strand=Plus/Plus
Query 80 ACTGGGCGTAAAGCGTGCGCAGGCGG-TTGTGTAAGACAGGTGTGAAATCCCCGGGCTTA 138
|||||| |||||||||||| |||||| |||| |||| || ||||||| ||||||||| |
Sbjct 1 ACTGGGTGTAAAGCGTGCGTAGGCGGATTGT-TAAGTGAGATGTGAAAGCCCCGGGCTCA 59
Query 139 ACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGG 185
||||||||| ||||||| |||| | ||||||| | ||||||
Sbjct 60 ACCTGGGAACTGCATTTCAAACTGGCAGTCTAGAGTATTGTAGAGGG 106
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1289597124192
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |