Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900013415.1_202016-02-08] 223 sequences; 9,369,803 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq115 187 4e-45 seq128 174 3e-41 seq127 143 4e-32 >seq115 Length=297 Score = 187 bits (206), Expect = 4e-45 Identities = 170/213 (80%), Gaps = 1/213 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||| ||||||||||||| | |||| || |||||||||||||||||| Sbjct 212 CCCACGCTTTCGCACCTCAGCGTCAGTATTGGCCCAGGAAGTCGCCTTCGCCACTGGTGT 153 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||| | ||||||||||||||||||||||||| ||||||||| || ||||| | || Sbjct 152 TCCTTCCGATATCTACGCATTTCACCGCTACAC-CGGAATTCCACTTCCCTCTACCATAC 94 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || || |||| || ||||||| ||||||||||| | ||||||||| |||| Sbjct 93 TCTAGTCAAGCAGTATCGAATGCAGTTCCCAGGTTGAGCCCAGGGCTTTCACATCCGACT 34 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAAT 213 | | |||||||| ||| ||||||||||||| Sbjct 33 TACTAATCCGCCTACGCGCGCTTTACACCCAAT 1 >seq128 Length=260 Score = 174 bits (192), Expect = 3e-41 Identities = 148/181 (82%), Gaps = 1/181 (1%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||||||||||||||||||||||| | |||||| | ||||||||||||||||||| Sbjct 182 CCCACGCTTTCGCGCCTCAGCGTCAGTACCGGTCCAGGTAGCCGCCTTCGCCACTGGTGT 123 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 || ||| ||||||||| |||||||| |||||| |||||||| | ||||||| | || Sbjct 122 TCTTCCCAATATCTACGAATTTCACCTCTACACTGGGAATTCCACTACCCTCTCCCGGAC 63 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCA-CATCTGAC 179 || || | | |||||||||| |||| ||||||||||||| | ||||| | |||||| Sbjct 62 TCTAGCACACCAGTTTCAAAGGCAGTTCCTGGGTTGAGCCCAGGGCTTTCACCCTCTGAC 3 Query 180 T 180 | Sbjct 2 T 2 >seq127 Length=275 Score = 143 bits (158), Expect = 4e-32 Identities = 159/211 (75%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||||||||||| ||||||||||||| |||||||| ||||||||||||||| ||| Sbjct 212 CCCACGCTTTCGTTCCTCAGCGTCAGTATCTGTCCAGGTGGCCGCCTTCGCCACTGATGT 153 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||| | || |||||||||||||||||||||| | |||||| ||||| ||| || Sbjct 152 TCCTTCCAATCTCTACGCATTTCACCGCTACACTGGAAATTCCACCACCCTCTACAGTAC 93 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || | ||||| |||||||| |||||||||| | |||||||||| || Sbjct 92 TCTAGTCTACCAGTTCAAAATGCAGTTCCAAGGTTGAGCCCTGGGCTTTCACATCTTGCT 33 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCA 211 | | |||||||| | |||||| |||| Sbjct 32 T-AATAACCGCCTACGAACGCTTTACGCCCA 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828798209533