Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900013415.1_202016-02-08] 223 sequences; 9,369,803 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq128 293 6e-77 seq115 277 4e-72 seq127 266 8e-69 >seq128 Length=260 Score = 293 bits (324), Expect = 6e-77 Identities = 215/249 (86%), Gaps = 1/249 (0%) Strand=Plus/Plus Query 111 AGTCAGAGG-TGAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAG 169 ||||||||| |||||| | |||||||||| || ||||| |||||||||| | ||||| Sbjct 2 AGTCAGAGGGTGAAAGCCCTGGGCTCAACCCAGGAACTGCCTTTGAAACTGGTGTGCTAG 61 Query 170 AGTGCAGGAGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGG 229 ||| | |||| || ||||||||||| ||||||| |||||||| |||||||||| ||| | Sbjct 62 AGTCCGGGAGAGGGTAGTGGAATTCCCAGTGTAGAGGTGAAATTCGTAGATATTGGGAAG 121 Query 230 AACACCAGTGGCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGG 289 |||||||||||||||||||||| |||||| | |||||| ||||||| ||||||||||| Sbjct 122 AACACCAGTGGCGAAGGCGGCTACCTGGACCGGTACTGACGCTGAGGCGCGAAAGCGTGG 181 Query 290 GGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTC 349 |||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||| Sbjct 182 GGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAGTGCTAGACGTC 241 Query 350 GGGGCGCAT 358 ||| |||| Sbjct 242 GGGCAGCAT 250 >seq115 Length=297 Score = 277 bits (306), Expect = 4e-72 Identities = 226/273 (83%), Gaps = 1/273 (0%) Strand=Plus/Plus Query 80 TGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACC 139 |||| |||||| | ||||||| || || |||||| || ||||||| | ||||||||| Sbjct 3 TGGGTGTAAAGCGCGCGTAGGCGGATTAGTAAGTCGGATGTGAAAGCCCTGGGCTCAACC 62 Query 140 CCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGT 199 || ||||| || || ||||| | ||||||| | || || |||||||||||| || Sbjct 63 TGGGAACTGCATTCGATACTGCTTGACTAGAGTATGGTAGAGGGAAGTGGAATTCCG-GT 121 Query 200 GTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGAC 259 ||||||||||||||||||||||| | |||||||||||||||||||||| ||| |||| | Sbjct 122 GTAGCGGTGAAATGCGTAGATATCGGAAGGAACACCAGTGGCGAAGGCGACTTCCTGGGC 181 Query 260 TGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGT 319 |||||| |||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 182 CAATACTGACGCTGAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGT 241 Query 320 CCACGCCGTAAACGATGAATACTAGGTGTCGGG 352 |||||||||||||||||| ||||| ||| ||| Sbjct 242 CCACGCCGTAAACGATGAGAACTAGATGTTGGG 274 >seq127 Length=275 Score = 266 bits (294), Expect = 8e-69 Identities = 220/267 (82%), Gaps = 1/267 (0%) Strand=Plus/Plus Query 78 ACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAA 137 ||||||||||||| || |||||| |||| ||||| ||| ||||||| | | ||||||| Sbjct 1 ACTGGGCGTAAAGCGTTCGTAGGCGGTTA-TTAAGCAAGATGTGAAAGCCCAGGGCTCAA 59 Query 138 CCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTA 197 || || ||||| ||| ||||| | ||||||| | | || || |||||||| | | Sbjct 60 CCTTGGAACTGCATTTTGAACTGGTAGACTAGAGTACTGTAGAGGGTGGTGGAATTTCCA 119 Query 198 GTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGG 257 |||||||||||||||||||||| ||| | ||||||| |||||||||||||||| |||| Sbjct 120 GTGTAGCGGTGAAATGCGTAGAGATTGGAAGGAACATCAGTGGCGAAGGCGGCCACCTGG 179 Query 258 ACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTA 317 || | |||||| |||||| |||||||||||||||| |||||||||||||||||||||| Sbjct 180 ACAGATACTGACGCTGAGGAACGAAAGCGTGGGGAGCGAACAGGATTAGATACCCTGGTA 239 Query 318 GTCCACGCCGTAAACGATGAATACTAG 344 ||||||||||||||||||| ||||| Sbjct 240 GTCCACGCCGTAAACGATGTCAACTAG 266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203197316864