Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900013415.1_202016-02-08] 223 sequences; 9,369,803 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq121 150 6e-34 seq87 138 4e-30 seq132 78.8 3e-12 >seq121 Length=289 Score = 150 bits (166), Expect = 6e-34 Identities = 138/170 (81%), Gaps = 7/170 (4%) Strand=Plus/Plus Query 198 AACGATAAGGGTAGTGGTATTTCACTTGCGCCG---AAACGGCTCCCACTTATTCTACAC 254 ||| ||| |||| |||||||||| |||||| ||||||||||| | ||| |||||| Sbjct 121 AACTATAGGGGTGTGGGTATTTCACGGGCGCCGCCGAAACGGCTCCCCCCTATACTACAC 180 Query 255 CTCTCAAGTCATTTCACAAAGTCGGA-CTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCC 313 | | || || | | || | | | ||||||||||||||||||||||||||||||||| Sbjct 181 CCCCCATGT--TCCCCCACGGCCCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCC 238 Query 314 GCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363 ||| | | ||||||||||||||||||||| ||||||||||||||||||| Sbjct 239 GCTCACGC-GCCAAGCCCGTTCCCTTGGCTATGGTTTCGCTAGATAGTAG 287 Score = 131 bits (144), Expect = 5e-28 Identities = 86/95 (91%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 11 TGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTT 70 ||||| | | ||||||||||||| |||||| ||||||| ||||| |||||||||||||| Sbjct 1 TGCTCGGCTGAAGATTTCTGTTCTTCATGAGCCCCCCTTGGGACATCTGCGTTATGGTTT 60 Query 71 AACAGATGTGCCGCCCCAGCCAAACTCCCCACCTG 105 |||||||||||||||||||||||||||||| |||| Sbjct 61 AACAGATGTGCCGCCCCAGCCAAACTCCCCGCCTG 95 >seq87 Length=315 Score = 138 bits (152), Expect = 4e-30 Identities = 90/99 (91%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||| | | ||||||||||||| |||||| ||||||| ||||| |||||||||| Sbjct 265 CTTTTGCTCGGCTGAAGATTTCTGTTCTTCATGAGCCCCCCTTGGGACATCTGCGTTATG 206 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTG 105 |||||||||||||||||||||||||||||||||| |||| Sbjct 205 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCGCCTG 167 Score = 118 bits (130), Expect = 3e-24 Identities = 115/144 (80%), Gaps = 7/144 (5%) Strand=Plus/Minus Query 198 AACGATAAGGGTAGTGGTATTTCACTTGCGCCG---AAACGGCTCCCACTTATTCTACAC 254 ||| ||| |||| | |||||||||| |||||| ||||||||||| | ||| |||||| Sbjct 141 AACTATAGGGGTGGGGGTATTTCACGGGCGCCGCCGAAACGGCTCCCCCCTATACTACAC 82 Query 255 CTCTCAAGTCATTTCACAAAGTCGGA-CTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCC 313 | | || || | | || | | | ||||||||||||||||||||||||||||||||| Sbjct 81 CCCCCATGT--TCCCCCACGGCCCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCC 24 Query 314 GCTGATTCCGCCAAGCCCGTTCCC 337 ||||| |||||||||||||||| Sbjct 23 GCTGA-CGCGCCAAGCCCGTTCCC 1 >seq132 Length=250 Score = 78.8 bits (86), Expect = 3e-12 Identities = 43/43 (100%), Gaps = 0/43 (0%) Strand=Plus/Minus Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520 ||||||||||||||||||||||||||||||||||||||||||| Sbjct 250 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635196353504