Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900013415.1_202016-02-08]
223 sequences; 9,369,803 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq121 150 6e-34
seq87 138 4e-30
seq132 78.8 3e-12
>seq121
Length=289
Score = 150 bits (166), Expect = 6e-34
Identities = 138/170 (81%), Gaps = 7/170 (4%)
Strand=Plus/Plus
Query 198 AACGATAAGGGTAGTGGTATTTCACTTGCGCCG---AAACGGCTCCCACTTATTCTACAC 254
||| ||| |||| |||||||||| |||||| ||||||||||| | ||| ||||||
Sbjct 121 AACTATAGGGGTGTGGGTATTTCACGGGCGCCGCCGAAACGGCTCCCCCCTATACTACAC 180
Query 255 CTCTCAAGTCATTTCACAAAGTCGGA-CTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCC 313
| | || || | | || | | | |||||||||||||||||||||||||||||||||
Sbjct 181 CCCCCATGT--TCCCCCACGGCCCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCC 238
Query 314 GCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363
||| | | ||||||||||||||||||||| |||||||||||||||||||
Sbjct 239 GCTCACGC-GCCAAGCCCGTTCCCTTGGCTATGGTTTCGCTAGATAGTAG 287
Score = 131 bits (144), Expect = 5e-28
Identities = 86/95 (91%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 11 TGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTT 70
||||| | | ||||||||||||| |||||| ||||||| ||||| ||||||||||||||
Sbjct 1 TGCTCGGCTGAAGATTTCTGTTCTTCATGAGCCCCCCTTGGGACATCTGCGTTATGGTTT 60
Query 71 AACAGATGTGCCGCCCCAGCCAAACTCCCCACCTG 105
|||||||||||||||||||||||||||||| ||||
Sbjct 61 AACAGATGTGCCGCCCCAGCCAAACTCCCCGCCTG 95
>seq87
Length=315
Score = 138 bits (152), Expect = 4e-30
Identities = 90/99 (91%), Gaps = 0/99 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||||||||| | | ||||||||||||| |||||| ||||||| ||||| ||||||||||
Sbjct 265 CTTTTGCTCGGCTGAAGATTTCTGTTCTTCATGAGCCCCCCTTGGGACATCTGCGTTATG 206
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTG 105
|||||||||||||||||||||||||||||||||| ||||
Sbjct 205 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCGCCTG 167
Score = 118 bits (130), Expect = 3e-24
Identities = 115/144 (80%), Gaps = 7/144 (5%)
Strand=Plus/Minus
Query 198 AACGATAAGGGTAGTGGTATTTCACTTGCGCCG---AAACGGCTCCCACTTATTCTACAC 254
||| ||| |||| | |||||||||| |||||| ||||||||||| | ||| ||||||
Sbjct 141 AACTATAGGGGTGGGGGTATTTCACGGGCGCCGCCGAAACGGCTCCCCCCTATACTACAC 82
Query 255 CTCTCAAGTCATTTCACAAAGTCGGA-CTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCC 313
| | || || | | || | | | |||||||||||||||||||||||||||||||||
Sbjct 81 CCCCCATGT--TCCCCCACGGCCCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCC 24
Query 314 GCTGATTCCGCCAAGCCCGTTCCC 337
||||| ||||||||||||||||
Sbjct 23 GCTGA-CGCGCCAAGCCCGTTCCC 1
>seq132
Length=250
Score = 78.8 bits (86), Expect = 3e-12
Identities = 43/43 (100%), Gaps = 0/43 (0%)
Strand=Plus/Minus
Query 478 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520
|||||||||||||||||||||||||||||||||||||||||||
Sbjct 250 TGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 208
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635196353504
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |