Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900013415.1_202016-02-08]
223 sequences; 9,369,803 total letters
Query= NC_011356.1
Length=54896
Score E
Sequences producing significant alignments: (Bits) Value
seq86 260 5e-65
>seq86
Length=863
Score = 260 bits (288), Expect = 5e-65
Identities = 176/197 (89%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 4096 TTTCCAGTTCTGCTATGCGCTTACTTCCATCCGCGATTACTCCCTCGTAATATTCACGCT 4155
||||||||| || || |||||||| ||||||| ||| || || |||||||| |||||||
Sbjct 410 TTTCCAGTTTAGCAATACGCTTACTCCCATCCGAGATAACACCTTCGTAATACTCACGCT 351
Query 4156 GCTCGTTGAGTTTTGATTTTGCTGCTTCAAGCTCAACACGCAGCTTCCCAACCGTAAGCG 4215
|||||||||||||||||||||||| |||||||||||||||||| ||||| || || ||||
Sbjct 350 GCTCGTTGAGTTTTGATTTTGCTGTTTCAAGCTCAACACGCAGTTTCCCTACTGTTAGCG 291
Query 4216 CAATCCCCTCGTTCTCCTGGTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCAT 4275
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 290 CAATATCCTCGTTCTCCTGGTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCAT 231
Query 4276 CCAGAAGCGCCAGCGCA 4292
|||| || ||||| ||
Sbjct 230 CCAGCAGTTCCAGCACA 214
Score = 235 bits (260), Expect = 2e-57
Identities = 145/155 (94%), Gaps = 0/155 (0%)
Strand=Plus/Minus
Query 4483 TTGCTTTTTCTGCCTTTTCACGCAGTGCCTGATAATTAATTTCGCTCACTTCGAACCTCT 4542
|||| | |||||| |||||||||||||||| | |||||||||||||||||||||||||
Sbjct 155 TTGCCTGCTCTGCCGCTTCACGCAGTGCCTGAGAGTTAATTTCGCTCACTTCGAACCTCT 96
Query 4543 CTGTTTACTGATAAGCTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAAC 4602
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 95 CTGTTTACTGATAAGTTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAAC 36
Query 4603 TGCCAGGCGTCTTCGTTCATCTATCGGATCGCCAC 4637
|||||||||||||||||||||||||||||||||
Sbjct 35 GACCAGGCGTCTTCGTTCATCTATCGGATCGCCAC 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 175545135133308
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |