Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900013415.1_202016-02-08] 223 sequences; 9,369,803 total letters Query= NC_011356.1 Length=54896 Score E Sequences producing significant alignments: (Bits) Value seq86 260 5e-65 >seq86 Length=863 Score = 260 bits (288), Expect = 5e-65 Identities = 176/197 (89%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 4096 TTTCCAGTTCTGCTATGCGCTTACTTCCATCCGCGATTACTCCCTCGTAATATTCACGCT 4155 ||||||||| || || |||||||| ||||||| ||| || || |||||||| ||||||| Sbjct 410 TTTCCAGTTTAGCAATACGCTTACTCCCATCCGAGATAACACCTTCGTAATACTCACGCT 351 Query 4156 GCTCGTTGAGTTTTGATTTTGCTGCTTCAAGCTCAACACGCAGCTTCCCAACCGTAAGCG 4215 |||||||||||||||||||||||| |||||||||||||||||| ||||| || || |||| Sbjct 350 GCTCGTTGAGTTTTGATTTTGCTGTTTCAAGCTCAACACGCAGTTTCCCTACTGTTAGCG 291 Query 4216 CAATCCCCTCGTTCTCCTGGTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCAT 4275 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 290 CAATATCCTCGTTCTCCTGGTCGCGGCGTTTGATGTATTGCTGGTTTCTTTCCCGTTCAT 231 Query 4276 CCAGAAGCGCCAGCGCA 4292 |||| || ||||| || Sbjct 230 CCAGCAGTTCCAGCACA 214 Score = 235 bits (260), Expect = 2e-57 Identities = 145/155 (94%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 4483 TTGCTTTTTCTGCCTTTTCACGCAGTGCCTGATAATTAATTTCGCTCACTTCGAACCTCT 4542 |||| | |||||| |||||||||||||||| | ||||||||||||||||||||||||| Sbjct 155 TTGCCTGCTCTGCCGCTTCACGCAGTGCCTGAGAGTTAATTTCGCTCACTTCGAACCTCT 96 Query 4543 CTGTTTACTGATAAGCTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAAC 4602 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 95 CTGTTTACTGATAAGTTCCAGATCCTCCTGGCAACTTGCACAAGTCCGACAACCCTGAAC 36 Query 4603 TGCCAGGCGTCTTCGTTCATCTATCGGATCGCCAC 4637 ||||||||||||||||||||||||||||||||| Sbjct 35 GACCAGGCGTCTTCGTTCATCTATCGGATCGCCAC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175545135133308