Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016385.1_202016-02-08] 145 sequences; 9,349,220 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq36 264 4e-68 seq98 179 1e-42 >seq36 Length=949 Score = 264 bits (292), Expect = 4e-68 Identities = 196/225 (87%), Gaps = 7/225 (3%) Strand=Plus/Minus Query 198 AACGATAAGGGTAGTGGTATTTCACTTGCGCCG---AAACGGCTCCCACTTATTCTACAC 254 ||| ||| |||| | |||||||||| |||||| ||||||||||| | ||| |||||| Sbjct 222 AACTATAGGGGTGGGGGTATTTCACGGGCGCCGCCGAAACGGCTCCCCCCTATACTACAC 163 Query 255 CTCTCAAGTCATTTCACAAAGTCGGA-CTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCC 313 | | || || | | || | | | ||||||||||||||||||||||||||||||||| Sbjct 162 CCCCCATGT--TCCCCCACGGCCCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCC 105 Query 314 GCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAG 373 ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 104 GCTGACGC-GCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAG 46 Query 374 TGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 45 TGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 1 Score = 138 bits (152), Expect = 4e-30 Identities = 90/99 (91%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||||||| | | ||||||||||||| |||||| ||||||| ||||| |||||||||| Sbjct 346 CTTTTGCTCGGCTGAAGATTTCTGTTCTTCATGAGCCCCCCTTGGGACATCTGCGTTATG 287 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTG 105 |||||||||||||||||||||||||||||||||| |||| Sbjct 286 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCGCCTG 248 >seq98 Length=316 Score = 179 bits (198), Expect = 1e-42 Identities = 101/102 (99%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 419 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTT 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1 GAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGAT 60 Query 479 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520 |||||||||||||||||||||||||||||||||||||||||| Sbjct 61 GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635197628960