Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016395.1_202016-02-08] 159 sequences; 9,375,731 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq86 215 8e-54 seq50 215 8e-54 seq108 143 4e-32 seq84 105 1e-20 >seq86 Length=411 Score = 215 bits (238), Expect = 8e-54 Identities = 192/234 (82%), Gaps = 15/234 (6%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||| | Sbjct 189 GTACAAAGGGCAGGGACGTAATCAGCGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 246 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||| | | |||||| | ||||||||| ||||| | | | | |||||| Sbjct 247 CTCGTTGAAGCGCCTC--TTGCAAAGCGCTATCCCCAGCACGACGGAGTCT--AAGATTC 302 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| | | || | ||||| ||||| || | | |||||||||||||||||||| Sbjct 303 CCCGGCCATCTCTGGCAAGG------ACTCGCTGCCTCCGTCAGTGTAGCGCGCGTGCGG 356 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCG-TGGC 233 |||||||| ||||||||||||||||||||||||||||||| |||||| |||| Sbjct 357 CCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTC--GCTTCCGCTGGC 408 >seq50 Length=4328 Score = 215 bits (238), Expect = 8e-54 Identities = 192/234 (82%), Gaps = 15/234 (6%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||| | Sbjct 2103 GTACAAAGGGCAGGGACGTAATCAGCGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 2046 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||| | | |||||| | ||||||||| ||||| | | | | |||||| Sbjct 2045 CTCGTTGAAGCGCCTC--TTGCAAAGCGCTATCCCCAGCACGACGGAGTCT--AAGATTC 1990 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| | | || | ||||| ||||| || | | |||||||||||||||||||| Sbjct 1989 CCCGGCCATCTCTGGCAAGG------ACTCGCTGCCTCCGTCAGTGTAGCGCGCGTGCGG 1936 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCG-TGGC 233 |||||||| ||||||||||||||||||||||||||||||| |||||| |||| Sbjct 1935 CCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTC--GCTTCCGCTGGC 1884 >seq108 Length=267 Score = 143 bits (158), Expect = 4e-32 Identities = 146/185 (79%), Gaps = 14/185 (8%) Strand=Plus/Plus Query 50 CTAGGAATTTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT 109 ||||||||| ||||||||||| | | |||||| | ||||||||| ||||| | | | Sbjct 1 CTAGGAATT-CCTCGTTGAAGCGCCTC--TTGCAAAGCGCTATCCCCAGCACGACGGAGT 57 Query 110 TTCAAAGATTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAG 169 | |||||| ||||| | | || | ||||| ||||| || | | ||||||||| Sbjct 58 CT--AAGATTCCCCGGCCATCTCTGGCAAGG------ACTCGCTGCCTCCGTCAGTGTAG 109 Query 170 CGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCG 229 ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||| Sbjct 110 CGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTC--GCTTCCG 167 Query 230 -TGGC 233 |||| Sbjct 168 CTGGC 172 >seq84 Length=502 Score = 105 bits (116), Expect = 1e-20 Identities = 69/74 (93%), Gaps = 3/74 (4%) Strand=Plus/Plus Query 161 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 220 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 3 TCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTC 62 Query 221 AAACTTCCG-TGGC 233 |||||| |||| Sbjct 63 --GCTTCCGCTGGC 74 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751998841685