Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016395.1_202016-02-08]
159 sequences; 9,375,731 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq76 197 6e-48
seq50 197 6e-48
>seq76
Length=800
Score = 197 bits (218), Expect = 6e-48
Identities = 127/138 (92%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 548 TGAGTAAG--AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTG 605
||||| || |||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 189 TGAGTGAGCCAGCACCCCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCG 248
Query 606 AAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAA 665
||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||| |
Sbjct 249 AAGCCTGAGGAAACTCTGGTGGAGGCCCGCAGCGGTTCTGACGTGCAAATCGATCGTCGA 308
Query 666 ATTTGGGTATAGGGGCGA 683
||||||||||||||||||
Sbjct 309 ATTTGGGTATAGGGGCGA 326
>seq50
Length=4328
Score = 197 bits (218), Expect = 6e-48
Identities = 127/138 (92%), Gaps = 2/138 (1%)
Strand=Plus/Plus
Query 548 TGAGTAAG--AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTG 605
||||| || |||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 3015 TGAGTGAGCCAGCACCCCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGCG 3074
Query 606 AAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAA 665
||||| |||||||||||||||||||| ||||||||||||| ||||||||||||||||| |
Sbjct 3075 AAGCCTGAGGAAACTCTGGTGGAGGCCCGCAGCGGTTCTGACGTGCAAATCGATCGTCGA 3134
Query 666 ATTTGGGTATAGGGGCGA 683
||||||||||||||||||
Sbjct 3135 ATTTGGGTATAGGGGCGA 3152
Score = 158 bits (174), Expect = 5e-36
Identities = 134/163 (82%), Gaps = 3/163 (2%)
Strand=Plus/Plus
Query 36 CGAC-GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
|||| ||||||||||||||||||||||||||||||| || |||| | | || || |
Sbjct 2733 CGACAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAA--GGTGGTAGGGTCCATCAAAGAC 2790
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
||||||| || ||||||||||||| ||||||| |||||| ||||||||||||| ||||
Sbjct 2791 TAAATATCAGCGAGAGACCGATAGCAAACAAGTACAGTGATGGAAAGATGAAAAGAACTT 2850
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAG 197
|| ||||||||| ||| || |||||||||| | |||||||
Sbjct 2851 TGAAAAGAGAGTGAAACAGTGCGTGAAATTGGGGGGAGGGAAG 2893
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079996589450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |