Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016395.1_202016-02-08] 159 sequences; 9,375,731 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq90 187 6e-45 seq151 107 5e-21 seq103 104 6e-20 seq152 84.2 6e-14 >seq90 Length=367 Score = 187 bits (206), Expect = 6e-45 Identities = 193/252 (77%), Gaps = 12/252 (5%) Strand=Plus/Plus Query 166 GACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATG 225 |||| |||| | ||||| | ||||||||| ||||||| |||||||||| |||||| Sbjct 15 GACTCGAGTCCGGTAGAGGAGAATGGAATTCCCGGTGTAGCGGTGAAATGCGCAGATATC 74 Query 226 TGGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAA 285 |||||||||||| | |||||||| | | ||||| |||||||||| | | ||||| Sbjct 75 GGGAGGAACACCAGTAGCGAAGGCGGTTCTCTGGGCCGGCACTGACGCTGAGGAGCGAAA 134 Query 286 GCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTA 345 ||||||||||||||||||||||||||||||||||||||||||| |||||| | |||| Sbjct 135 GCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGGTGGGTACTA 194 Query 346 GTTGTTGGGGATTTACTTCC-------TTGGTAACGTAGCTAACGCGTGAAGTTG-ACCG 397 | ||| ||| | | ||| | || |||||||||||| | |||| | ||| Sbjct 195 GGTGTGGGG----TCCATCCAACGAGATCTGTGCCGTAGCTAACGCATTAAGTAGCCCCG 250 Query 398 CCTGGGGAATAC 409 |||||||| ||| Sbjct 251 CCTGGGGAGTAC 262 >seq151 Length=117 Score = 107 bits (118), Expect = 5e-21 Identities = 94/117 (80%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 36 CAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGT 95 ||||||||||||||||||||||||||| ||||||| |||||| | ||||||||||| | Sbjct 1 CAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTATCCGGAATCATTGGGCGTAAAGAGC 60 Query 96 GCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAACCTGGGAATTGCA 152 || |||||||| | ||| | | |||||||| | |||| ||||| | || |||| Sbjct 61 TCGTAGGCGGTTCAGCAAGTCGGCTGTGAAATTTCGAGGCTCAACCTCGAAACTGCA 117 >seq103 Length=299 Score = 104 bits (114), Expect = 6e-20 Identities = 103/133 (77%), Gaps = 4/133 (3%) Strand=Plus/Minus Query 281 CGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATC 340 |||||||||||| ||||||||||||||||||||||||||||||||||| |||||| | Sbjct 297 CGAAAGCGTGGGTAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGTTGGA 238 Query 341 AACTAGTTGTTGGG----GATTTACTTCCTTGGTAACGTAGCTAACGCGTGAAGTTGACC 396 ||||| ||| | | |||| || | || || ||||||||| | |||| || Sbjct 237 TACTAGGTGTGGCGTCCCGATTAACGGTCGCCGTGCCGAAGCTAACGCATTAAGTATCCC 178 Query 397 GCCTGGGGAATAC 409 ||||||||| ||| Sbjct 177 GCCTGGGGAGTAC 165 >seq152 Length=116 Score = 84.2 bits (92), Expect = 6e-14 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 36 CAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGT 95 |||||||||||||||||||||||| ||| |||| |||| ||| ||||||||||| | Sbjct 1 CAGCAGCCGCGGTAATACGTAGGGGCCAAACGTTGTCCGGATTTATTGGGCGTAAAGGGC 60 Query 96 GCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAACC 141 || |||||||| ||| | |||||| ||| ||||| |||| Sbjct 61 TCGTAGGCGGTTCAACAAGTCGATCGTGAAAGCCCGGGGCTCAACC 106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289597949536