Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016395.1_202016-02-08]
159 sequences; 9,375,731 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq50 116 4e-24
seq89 95.1 1e-17
>seq50
Length=4328
Score = 116 bits (128), Expect = 4e-24
Identities = 132/173 (76%), Gaps = 13/173 (8%)
Strand=Plus/Plus
Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCATGGAA 73
||||||||| ||||||||| |||||| |||| || ||||| |||| |||||||
Sbjct 1254 TTACTTTGAGGAAATTAGAGTGTTCAAGGCAGTAGTT-----GAATATATTAGCATGGAA 1308
Query 74 TAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAA 133
||| |||| |||| | ||||||| ||||| |||| || |||| |||||||| ||
Sbjct 1309 TAACAGAAGAGGA--TACGGTTCT--TTTGTTGGTTCG--GGGCCGC--GTAATGATTAA 1360
Query 134 TACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186
| ||| |||||||| ||||||||| |||| |||||||||||||||||
Sbjct 1361 CAGGGACGGTCGGGGGCGTCAGTATTGGGGCGTCAGAGGTGAAATTCTTGGAT 1413
>seq89
Length=371
Score = 95.1 bits (104), Expect = 1e-17
Identities = 102/131 (78%), Gaps = 8/131 (6%)
Strand=Plus/Minus
Query 56 GAATACATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGG 115
||||| |||| |||||||||| |||| |||| | ||||||| ||||| |||| ||
Sbjct 369 GAATATATTAGCATGGAATAACAGAAGAGGA--TACGGTTCT--TTTGTTGGTTCG--GG 316
Query 116 ACCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGA 175
|||| |||||||| || | ||| |||||||| ||||||||| |||| ||||||
Sbjct 315 GCCGC--GTAATGATTAACAGGGACGGTCGGGGGCGTCAGTATTGGGGCGTCAGAGGTGA 258
Query 176 AATTCTTGGAT 186
|||||||||||
Sbjct 257 AATTCTTGGAT 247
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511999211360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |