Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016395.1_202016-02-08] 159 sequences; 9,375,731 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq50 116 4e-24 seq89 95.1 1e-17 >seq50 Length=4328 Score = 116 bits (128), Expect = 4e-24 Identities = 132/173 (76%), Gaps = 13/173 (8%) Strand=Plus/Plus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCATGGAA 73 ||||||||| ||||||||| |||||| |||| || ||||| |||| ||||||| Sbjct 1254 TTACTTTGAGGAAATTAGAGTGTTCAAGGCAGTAGTT-----GAATATATTAGCATGGAA 1308 Query 74 TAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAA 133 ||| |||| |||| | ||||||| ||||| |||| || |||| |||||||| || Sbjct 1309 TAACAGAAGAGGA--TACGGTTCT--TTTGTTGGTTCG--GGGCCGC--GTAATGATTAA 1360 Query 134 TACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGAT 186 | ||| |||||||| ||||||||| |||| ||||||||||||||||| Sbjct 1361 CAGGGACGGTCGGGGGCGTCAGTATTGGGGCGTCAGAGGTGAAATTCTTGGAT 1413 >seq89 Length=371 Score = 95.1 bits (104), Expect = 1e-17 Identities = 102/131 (78%), Gaps = 8/131 (6%) Strand=Plus/Minus Query 56 GAATACATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGG 115 ||||| |||| |||||||||| |||| |||| | ||||||| ||||| |||| || Sbjct 369 GAATATATTAGCATGGAATAACAGAAGAGGA--TACGGTTCT--TTTGTTGGTTCG--GG 316 Query 116 ACCGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGA 175 |||| |||||||| || | ||| |||||||| ||||||||| |||| |||||| Sbjct 315 GCCGC--GTAATGATTAACAGGGACGGTCGGGGGCGTCAGTATTGGGGCGTCAGAGGTGA 258 Query 176 AATTCTTGGAT 186 ||||||||||| Sbjct 257 AATTCTTGGAT 247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511999211360