Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016405.1_202016-02-08]
164 sequences; 9,359,670 total letters
Query= AAMG01000383.1
Length=435
Score E
Sequences producing significant alignments: (Bits) Value
seq100 226 7e-57
seq113 208 2e-51
seq118 154 4e-35
seq153 132 1e-28
seq160 86.0 2e-14
>seq100
Length=274
Score = 226 bits (250), Expect = 7e-57
Identities = 204/255 (80%), Gaps = 1/255 (0%)
Strand=Plus/Plus
Query 82 TGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAACC 141
||||||||||||| | | |||||| | | ||| | | ||||||| ||| ||||| |||
Sbjct 3 TGGGCGTAAAGCGCGTGTAGGCGGCTTGGCAAGTCGGATGTGAAAGCCCGGGGCTCAACT 62
Query 142 TGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGT 201
||||||||| | | ||||| ||||||| | ||||| ||| |||||||| ||
Sbjct 63 CCGGAATTGCACTCGAAACTGCCTCGCTAGAGTCTCGGAGAGGAGGGCGGAATTCCCGGT 122
Query 202 GTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCC-CCCTGGG 260
|||| ||||||| ||||||||| |||||||||||| |||||||||| ||| | ||||
Sbjct 123 GTAGAGGTGAAATTCGTAGATATCGGGAGGAACACCAGTGGCGAAGGCGGCCACTCTGGA 182
Query 261 ATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAG 320
| ||||||||| | | ||||||||||||||||||||||||||||||||||||||||
Sbjct 183 CGATGACTGACGCTGAGACGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAG 242
Query 321 TCCACGCCCTAAACG 335
|||||||| ||||||
Sbjct 243 TCCACGCCGTAAACG 257
>seq113
Length=216
Score = 208 bits (230), Expect = 2e-51
Identities = 154/180 (86%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 167 ACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGT 226
|||||||| | |||||| ||| ||||| || ||||||| |||||||||||||| || |
Sbjct 5 ACTAGAGTTTTGTAGAGGGTGGTAGAATTTCAGGTGTAGCGGTGAAATGCGTAGAGATCT 64
Query 227 GGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAG 286
| ||||| |||| |||||||||| ||| ||||| | ||||||||||||| |||||||
Sbjct 65 GAAGGAATACCAGTGGCGAAGGCGGCCACCTGGACAATAACTGACGCTCATGTACGAAAG 124
Query 287 CGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAG 346
|||||||||||||| ||||||||||||| ||||||||||||| |||||||| ||||||||
Sbjct 125 CGTGGGGAGCAAACGGGATTAGATACCCCGGTAGTCCACGCCGTAAACGATGTCAACTAG 184
>seq118
Length=184
Score = 154 bits (170), Expect = 4e-35
Identities = 143/179 (80%), Gaps = 2/179 (1%)
Strand=Plus/Plus
Query 82 TGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAACC 141
|||||||||||||| || ||||||| |||| || ||||||| ||| ||||| ||||
Sbjct 3 TGGGCGTAAAGCGTTCGTAGGCGGTCTATTAAGCAAGATGTGAAAGCCCAGGGCTCAACC 62
Query 142 TGGGAATTGCATTTGTGACTGCACGACTAGAGT-GTGTCAGAGGGGGGTGGAATTCCACG 200
| |||| ||||||| |||| ||||||||| ||| |||||| ||||||||| | |
Sbjct 63 TTGGAACTGCATTTTGAACTGGTAGACTAGAGTACTGT-AGAGGGTGGTGGAATTTCCAG 121
Query 201 TGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGG 259
|||||| |||||||||||||| || | ||||||| || |||||||||| ||| |||||
Sbjct 122 TGTAGCGGTGAAATGCGTAGAGATTGGAAGGAACATCAGTGGCGAAGGCGGCCACCTGG 180
>seq153
Length=115
Score = 132 bits (146), Expect = 1e-28
Identities = 78/81 (96%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 266 ACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 325
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3 ACTGACGCTGAGGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 62
Query 326 GCCCTAAACGATATCAACTAG 346
|||||||||||| ||||||||
Sbjct 63 GCCCTAAACGATGTCAACTAG 83
>seq160
Length=103
Score = 86.0 bits (94), Expect = 2e-14
Identities = 76/94 (81%), Gaps = 1/94 (1%)
Strand=Plus/Plus
Query 168 CTAGAGTGTGTCAGAGGGGG-GTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGT 226
||||||| || |||||| |||||||| | ||||||| |||||||||||||||||
Sbjct 6 CTAGAGTATGGTAGAGGGAAAGTGGAATTTCCGGTGTAGCGGTGAAATGCGTAGATATCG 65
Query 227 GGAGGAACACCAATGGCGAAGGCAGCCCCCTGGG 260
| |||||||||| |||||||||| | | |||||
Sbjct 66 GAAGGAACACCAGTGGCGAAGGCGGACTTCTGGG 99
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1289597885056
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |