Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016405.1_202016-02-08] 164 sequences; 9,359,670 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq100 226 7e-57 seq113 208 2e-51 seq118 154 4e-35 seq153 132 1e-28 seq160 86.0 2e-14 >seq100 Length=274 Score = 226 bits (250), Expect = 7e-57 Identities = 204/255 (80%), Gaps = 1/255 (0%) Strand=Plus/Plus Query 82 TGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAACC 141 ||||||||||||| | | |||||| | | ||| | | ||||||| ||| ||||| ||| Sbjct 3 TGGGCGTAAAGCGCGTGTAGGCGGCTTGGCAAGTCGGATGTGAAAGCCCGGGGCTCAACT 62 Query 142 TGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGT 201 ||||||||| | | ||||| ||||||| | ||||| ||| |||||||| || Sbjct 63 CCGGAATTGCACTCGAAACTGCCTCGCTAGAGTCTCGGAGAGGAGGGCGGAATTCCCGGT 122 Query 202 GTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCC-CCCTGGG 260 |||| ||||||| ||||||||| |||||||||||| |||||||||| ||| | |||| Sbjct 123 GTAGAGGTGAAATTCGTAGATATCGGGAGGAACACCAGTGGCGAAGGCGGCCACTCTGGA 182 Query 261 ATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAG 320 | ||||||||| | | |||||||||||||||||||||||||||||||||||||||| Sbjct 183 CGATGACTGACGCTGAGACGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAG 242 Query 321 TCCACGCCCTAAACG 335 |||||||| |||||| Sbjct 243 TCCACGCCGTAAACG 257 >seq113 Length=216 Score = 208 bits (230), Expect = 2e-51 Identities = 154/180 (86%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 167 ACTAGAGTGTGTCAGAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGT 226 |||||||| | |||||| ||| ||||| || ||||||| |||||||||||||| || | Sbjct 5 ACTAGAGTTTTGTAGAGGGTGGTAGAATTTCAGGTGTAGCGGTGAAATGCGTAGAGATCT 64 Query 227 GGAGGAACACCAATGGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAG 286 | ||||| |||| |||||||||| ||| ||||| | ||||||||||||| ||||||| Sbjct 65 GAAGGAATACCAGTGGCGAAGGCGGCCACCTGGACAATAACTGACGCTCATGTACGAAAG 124 Query 287 CGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAG 346 |||||||||||||| ||||||||||||| ||||||||||||| |||||||| |||||||| Sbjct 125 CGTGGGGAGCAAACGGGATTAGATACCCCGGTAGTCCACGCCGTAAACGATGTCAACTAG 184 >seq118 Length=184 Score = 154 bits (170), Expect = 4e-35 Identities = 143/179 (80%), Gaps = 2/179 (1%) Strand=Plus/Plus Query 82 TGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGGCTTAACC 141 |||||||||||||| || ||||||| |||| || ||||||| ||| ||||| |||| Sbjct 3 TGGGCGTAAAGCGTTCGTAGGCGGTCTATTAAGCAAGATGTGAAAGCCCAGGGCTCAACC 62 Query 142 TGGGAATTGCATTTGTGACTGCACGACTAGAGT-GTGTCAGAGGGGGGTGGAATTCCACG 200 | |||| ||||||| |||| ||||||||| ||| |||||| ||||||||| | | Sbjct 63 TTGGAACTGCATTTTGAACTGGTAGACTAGAGTACTGT-AGAGGGTGGTGGAATTTCCAG 121 Query 201 TGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCCCCTGG 259 |||||| |||||||||||||| || | ||||||| || |||||||||| ||| ||||| Sbjct 122 TGTAGCGGTGAAATGCGTAGAGATTGGAAGGAACATCAGTGGCGAAGGCGGCCACCTGG 180 >seq153 Length=115 Score = 132 bits (146), Expect = 1e-28 Identities = 78/81 (96%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 266 ACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 325 ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3 ACTGACGCTGAGGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 62 Query 326 GCCCTAAACGATATCAACTAG 346 |||||||||||| |||||||| Sbjct 63 GCCCTAAACGATGTCAACTAG 83 >seq160 Length=103 Score = 86.0 bits (94), Expect = 2e-14 Identities = 76/94 (81%), Gaps = 1/94 (1%) Strand=Plus/Plus Query 168 CTAGAGTGTGTCAGAGGGGG-GTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGT 226 ||||||| || |||||| |||||||| | ||||||| ||||||||||||||||| Sbjct 6 CTAGAGTATGGTAGAGGGAAAGTGGAATTTCCGGTGTAGCGGTGAAATGCGTAGATATCG 65 Query 227 GGAGGAACACCAATGGCGAAGGCAGCCCCCTGGG 260 | |||||||||| |||||||||| | | ||||| Sbjct 66 GAAGGAACACCAGTGGCGAAGGCGGACTTCTGGG 99 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289597885056