Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016405.1_202016-02-08] 164 sequences; 9,359,670 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq100 179 6e-43 seq118 111 3e-22 seq113 107 3e-21 seq160 91.5 2e-16 >seq100 Length=274 Score = 179 bits (198), Expect = 6e-43 Identities = 170/215 (79%), Gaps = 3/215 (1%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAAT--CCGCCTTCGCCACTGGT 58 |||||||||||||| |||||||||||| | |||||| | | ||||||||||||||||| Sbjct 214 CCCACGCTTTCGCGTCTCAGCGTCAGTCATCGTCCAG-AGTGGCCGCCTTCGCCACTGGT 156 Query 59 GTTCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGC 118 |||||||| ||||||||| |||||||| |||||| ||||||||| ||||||| Sbjct 155 GTTCCTCCCGATATCTACGAATTTCACCTCTACACCGGGAATTCCGCCCTCCTCTCCGAG 96 Query 119 ACTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGA 178 |||| || | ||||||| | |||| | ||||||||| | ||||||||| || Sbjct 95 ACTCTAGCGAGGCAGTTTCGAGTGCAATTCCGGAGTTGAGCCCCGGGCTTTCACATCCGA 36 Query 179 CTTGCCTTCCCGCCTACACGCCCTTTACACCCAAT 213 |||||| |||||||||||| |||||| |||||| Sbjct 35 CTTGCCAAGCCGCCTACACGCGCTTTACGCCCAAT 1 >seq118 Length=184 Score = 111 bits (122), Expect = 3e-22 Identities = 135/184 (73%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 30 CTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTCCGTATATCTACGCATTTCACCGCT 89 |||||||| ||||||||||||||| ||||||| | || |||||||||||||||||| Sbjct 184 CTGTCCAGGTGGCCGCCTTCGCCACTGATGTTCCTTCCAATCTCTACGCATTTCACCGCT 125 Query 90 ACACACGGAATTCCGATTGCCTCTCCAGCACTCAAGAAAAACAGTTTCAAATGCAGGCTA 149 |||| | |||||| ||||| ||| |||| || | ||||| |||||||| Sbjct 124 ACACTGGAAATTCCACCACCCTCTACAGTACTCTAGTCTACCAGTTCAAAATGCAGTTCC 65 Query 150 TGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCTTCCCGCCTACACGCCCTTTACACC 209 |||||||||| | |||||||||| ||| |||||||| | |||||| || Sbjct 64 AAGGTTGAGCCCTGGGCTTTCACATCTTGCTTAATAGACCGCCTACGAACGCTTTACGCC 5 Query 210 CAAT 213 |||| Sbjct 4 CAAT 1 >seq113 Length=216 Score = 107 bits (118), Expect = 3e-21 Identities = 85/102 (83%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||||||||||| | | ||||||||||| ||||||| ||||||||||||||||| | Sbjct 130 CCCACGCTTTCGTACATGAGCGTCAGTTATTGTCCAGGTGGCCGCCTTCGCCACTGGTAT 71 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTC 102 |||| | || |||||||||||||||||||||| | ||||| Sbjct 70 TCCTTCAGATCTCTACGCATTTCACCGCTACACCTGAAATTC 29 >seq160 Length=103 Score = 91.5 bits (100), Expect = 2e-16 Identities = 62/70 (89%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 34 CCAGCAATCCGCCTTCGCCACTGGTGTTCCTCCGTATATCTACGCATTTCACCGCTACAC 93 |||| | |||||||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct 98 CCAGAAGTCCGCCTTCGCCACTGGTGTTCCTTCCGATATCTACGCATTTCACCGCTACAC 39 Query 94 ACGGAATTCC 103 | |||||| Sbjct 38 CGGAAATTCC 29 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828798683244