Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016405.1_202016-02-08] 164 sequences; 9,359,670 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq100 262 9e-68 seq113 179 9e-43 seq118 158 3e-36 seq153 120 7e-25 seq160 102 2e-19 >seq100 Length=274 Score = 262 bits (290), Expect = 9e-68 Identities = 222/272 (82%), Gaps = 1/272 (0%) Strand=Plus/Plus Query 80 TGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACC 139 ||||||||||| | | ||||| || || ||||| || ||||||| | |||||||| Sbjct 3 TGGGCGTAAAGCGCGTGTAGGCGGCTTGGCAAGTCGGATGTGAAAGCCCGGGGCTCAACT 62 Query 140 CCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGT 199 |||| | ||| | |||||||| |||||||| |||| || | |||||||| || Sbjct 63 CCGGAATTGCACTCGAAACTGCCTCGCTAGAGTCTCGGAGAGGAGGGCGGAATTCCCGGT 122 Query 200 GTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGG-CTTGCTGGA 258 |||| |||||||| ||||||||| ||||||||||||||||||||||||| | ||||| Sbjct 123 GTAGAGGTGAAATTCGTAGATATCGGGAGGAACACCAGTGGCGAAGGCGGCCACTCTGGA 182 Query 259 CTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAG 318 | | |||||| ||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct 183 CGATGACTGACGCTGAGACGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAG 242 Query 319 TCCACGCCGTAAACGATGAATACTAGGTGTCG 350 ||||||||||||||| || || |||||||||| Sbjct 243 TCCACGCCGTAAACGTTGGATGCTAGGTGTCG 274 >seq113 Length=216 Score = 179 bits (198), Expect = 9e-43 Identities = 135/159 (85%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 186 GTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAG 245 || ||||| | |||||||||||||||||||||| || | ||||| ||||||||||||| Sbjct 26 GTAGAATTTCAGGTGTAGCGGTGAAATGCGTAGAGATCTGAAGGAATACCAGTGGCGAAG 85 Query 246 GCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTA 305 ||||| |||||| |||||||| || | | |||||||||||||||||||| |||||| Sbjct 86 GCGGCCACCTGGACAATAACTGACGCTCATGTACGAAAGCGTGGGGAGCAAACGGGATTA 145 Query 306 GATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAG 344 ||||||| ||||||||||||||||||||||| ||||| Sbjct 146 GATACCCCGGTAGTCCACGCCGTAAACGATGTCAACTAG 184 >seq118 Length=184 Score = 158 bits (174), Expect = 3e-36 Identities = 143/180 (79%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 80 TGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAACC 139 ||||||||||| || |||||| ||| | ||||| ||| ||||||| | | ||||||||| Sbjct 3 TGGGCGTAAAGCGTTCGTAGGCGGTCTATTAAGCAAGATGTGAAAGCCCAGGGCTCAACC 62 Query 140 CCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAGT 199 || ||||| ||| ||||| | ||||||| | | || || |||||||| | ||| Sbjct 63 TTGGAACTGCATTTTGAACTGGTAGACTAGAGTACTGTAGAGGGTGGTGGAATTTCCAGT 122 Query 200 GTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGGAC 259 |||||||||||||||||||| ||| | ||||||| |||||||||||||||| |||||| Sbjct 123 GTAGCGGTGAAATGCGTAGAGATTGGAAGGAACATCAGTGGCGAAGGCGGCCACCTGGAC 182 >seq153 Length=115 Score = 120 bits (132), Expect = 7e-25 Identities = 75/81 (93%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 264 ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 323 |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3 ACTGACGCTGAGGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTAGTCCAC 62 Query 324 GCCGTAAACGATGAATACTAG 344 ||| ||||||||| ||||| Sbjct 63 GCCCTAAACGATGTCAACTAG 83 >seq160 Length=103 Score = 102 bits (112), Expect = 2e-19 Identities = 82/98 (84%), Gaps = 1/98 (1%) Strand=Plus/Plus Query 161 CAGGGCTAGAGTGCAGGAG-GGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGA 219 ||| |||||||| | || ||| |||||||||| | |||||||||||||||||||||| Sbjct 1 CAGAGCTAGAGTATGGTAGAGGGAAAGTGGAATTTCCGGTGTAGCGGTGAAATGCGTAGA 60 Query 220 TATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCTGG 257 ||| | ||||||||||||||||||||||| | |||| Sbjct 61 TATCGGAAGGAACACCAGTGGCGAAGGCGGACTTCTGG 98 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203198026752