Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Komagataella_20pastoris_20[genbank_20GCA_5F900016425.1_202016-02-08] 598 sequences; 9,476,861 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq78 215 8e-54 seq56 215 8e-54 seq76 98.7 1e-18 >seq78 Length=557 Score = 215 bits (238), Expect = 8e-54 Identities = 192/234 (82%), Gaps = 15/234 (6%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||| | Sbjct 164 GTACAAAGGGCAGGGACGTAATCAGCGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 221 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||| | | |||||| | ||||||||| ||||| | | | | |||||| Sbjct 222 CTCGTTGAAGCGCCTC--TTGCAAAGCGCTATCCCCAGCACGACGGAGTCT--AAGATTC 277 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| | | || | ||||| ||||| || | | |||||||||||||||||||| Sbjct 278 CCCGGCCATCTCTGGCAAGG------ACTCGCTGCCTCCGTCAGTGTAGCGCGCGTGCGG 331 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCG-TGGC 233 |||||||| ||||||||||||||||||||||||||||||| |||||| |||| Sbjct 332 CCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTC--GCTTCCGCTGGC 383 >seq56 Length=4035 Score = 215 bits (238), Expect = 8e-54 Identities = 192/234 (82%), Gaps = 15/234 (6%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||| | Sbjct 2126 GTACAAAGGGCAGGGACGTAATCAGCGCGAGCT-GATGACTCGCGCTTACTAGGAATT-C 2069 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 |||||||||| | | |||||| | ||||||||| ||||| | | | | |||||| Sbjct 2068 CTCGTTGAAGCGCCTC--TTGCAAAGCGCTATCCCCAGCACGACGGAGTCT--AAGATTC 2013 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||||| | | || | ||||| ||||| || | | |||||||||||||||||||| Sbjct 2012 CCCGGCCATCTCTGGCAAGG------ACTCGCTGCCTCCGTCAGTGTAGCGCGCGTGCGG 1959 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCG-TGGC 233 |||||||| ||||||||||||||||||||||||||||||| |||||| |||| Sbjct 1958 CCCAGAACGTCTAAGGGCATCACAGACCTGTTATTGCCTC--GCTTCCGCTGGC 1907 >seq76 Length=686 Score = 98.7 bits (108), Expect = 1e-18 Identities = 64/68 (94%), Gaps = 2/68 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||| ||||||| ||||||||||||||||||||||| ||| Sbjct 621 GTACAAAGGGCAGGGACGTAATCAGCGCGAGC-TGATGACTCGCGCTTACTAGGAA-TTC 678 Query 61 CTCGTTGA 68 |||||||| Sbjct 679 CTCGTTGA 686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751995643570